Gene Avin_02340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_02340 
Symbol 
ID7759195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp224187 
End bp224603 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content69% 
IMG OID643803159 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002797470 
Protein GI226942397 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0293457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCC AAACGCCCGA AAATGACCGC CGCGCCCGGG GCGAAGCCGC ACTGACGGAA 
ATCGCCGGCG GCGCCGGGCG GAACGTGATC GACTCGTTGC GGGACATCGC CCCGGAACTG
GCCGACTGGA TCCTCGACTT CAGCTACGGC GACGTCTTCT CCCGCCCCGG GCTCGACTAC
TGCACCCGGG AACTGGCGAC CGTCGCGGCG CTGACGGCCA TGGGCAATGC CCAGCCGCAG
TTGAAGGTGC ATATCGGCGG CGCCCTGAAC GTGGGCTGCG AACCGGCGGC GATCATCGAC
GTGATCCTGC AGATGGCGGT CTATGCCGGC TTTCCCAGCG CCCTGAACGG CGTGGCGGCG
GCACGCGAGG TATTCGACGA CCGCGGTATC GACCCGCGCG CCGCTGGGAA AGGTTAG
 
Protein sequence
MASQTPENDR RARGEAALTE IAGGAGRNVI DSLRDIAPEL ADWILDFSYG DVFSRPGLDY 
CTRELATVAA LTAMGNAQPQ LKVHIGGALN VGCEPAAIID VILQMAVYAG FPSALNGVAA
AREVFDDRGI DPRAAGKG