| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_01120 |
|---|
| Symbol | |
|---|
| ID | 7759079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 113685 |
|---|
| End bp | 116066 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643803038 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_002797354 |
|---|
| Protein GI | 226942281 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCAC GCCAAACCCG CCGTTTTCGC ATCCCATTGA CGCTGGCCGT TCCCTTCGTC
CTGTCCGGCG TGCCCGCCCT GCTGTACGGC GCCGCCGCGT CGGCCGCCGA ACTGCGGTAT
TACGAGATTC CCGCCGGTCC GCTGGCCGAG CGGCTCAACC GGTTCGCCGC CCAGGCCGGC
ATCCATGTGG CGGGCGACGC TGCCCTCACC GCCGGCAAGC GGAGCCAGCC GCTCGACGGC
ACGTATGAAA TCGAGCAGGC GCTGAACATC CTGCTCGAAG GCAGCGGATT GCAGGCCGTG
CCGACCCGGA CCGGCGGCTA CGAGGTGCGG GTCCTGGCGG ATGGCGGCGC TGGCATGGCG
CTGGATGCGA TCAGCGTCAA CGAGGTCGCC GAGGAGCGGA CCTACCGGGC ATCGACGAGC
GCCATCGGCG ACAAGTTCGA GACGCCGTTC CTGGAGCAGT CGCAGACCGC CTACAGCGTC
ACCCGGCAGG TGCTGGACGA CTTCGCGGTG AGCGATCTGG AGGAAACCGT CAAGTTCGTC
CCCGGCATCA CGGTCGGCAA CAGCTTCGGC GGCACCCAGG ATTCCCTGGT CAAGCGCGGC
TTCGGCAACG GGGTCGACGG CGGGGTGTTG CGCGACGGCA TCCGCACCGC CCGCGGGCGC
AACTTCAACA GCATCACCAC CGAGCGGGTC GAGGTGCTCA AGGGGCCGGC TTCCCTGCTC
TACGGCATGC AGGAGCCCGG CGGGGTGATC AACGTCATCA GCAAGAAACC CACCTACCAG
TGGCGCGGCA CCCTGGGCGG ACAGCTCAGC AGCGAAGGCG GCGGCAGCGG TTATTTCGAT
GTATCCGGCC CCCTGGGTGG GAGCGGTTTC GCCTTCCGCC TGATCGGCCA GCACAAGGAC
GAGGACTACT GGCGCAACTT CGGCGTCAAC CGCGACAAGG TGGTCGCGCC GTCGCTGGCC
TTCGAGAGCG AGGCCTTCTC GGCCACCCTG TCCTACGAGT ATTCCGACTA TTCCTCGGTT
CTCGATCGTG GCGCCTTCCT CTACGACGGC CACGCGGTCG GCGATCGCGA TCATCGGCTC
GACGAGCACT GGACGCGGAT CGAGGGCCAT CGCCAGTACG CCAGCCTGGC CCTGGAGTAC
CGTTTCTCGC CGACCTCGCG CCTGCGCTTC AACTACGGCT GGAACCAGGA CGACTCCAGC
GACTTCCAGG CCGATCCGAA CGCCTACAAC CCGGAAACCG GGGAACTGCG CCGACGCTTT
CGCAGCAACC CGGATATCGA GCGCAGCCGC AACTACGCCG CCCTGGACTG GCTCAACGAA
CTGGAGCTTG GCGGCATGCG CCACGAGTTG ACCCTCGGCG CCGACCACGA GCGCCACGAC
GAGTCGAACG GCTTCTTCCA TCAAGGTCCC AACACCTGGG GCTTCGACCC GGAGTCGCCG
CACTACGGCG ATCTGGAGCG GACCGAGATC GTCAATCTCG GCAACAGCCA GCAGCGCTCG
CGGGTGCGCA TGCTGTCGGT ATACGCCAAG GACAACATCC ACATCGGCGA GCACTGGATA
TTGTCTCTCG GCCTGCGCCA TCAAAGGTTC CGCCAGCGGG ACGGGCAGGG CATCCCTTAC
CAGATCGGCA CCAATGTGAA CAAGATCAAG AACCTGCCCT TCGCCGGCCT GGTCTACAAG
GTGAACGATG AGTTTTCCCT GTACGCCAAC TACAGCGAAT CCTACAAGCC GAACATCGTC
GAGGCCGGCA CCGGCGTGGA TGGCGGCAGC GACCCGGAGG AGGGCCGCCA GTACGAAATC
GGTTTCCGCT ACGACAACGG CTGGCTGTCG GGACTGGTCG CCCTGTTCGA TATCCGCAAG
GAGAACATCC AGACCACCGA GACCGTCGGC GGCGAGCGGT TCACCCGGGC GGTGGGGGAG
GCCCGCTCGC GTGGCCTGGA GGCCAGCCTC AACGGGCAGT TGGGCGAGCG CTGGAACGTC
ATCGCCAACT ACGCCTACAC CGATACCAAG GTGCTCAAGG ACACGGAGGC CACCGAAGAC
AACGAACTGG TCAACGTCGC CCACAACGTC GCCGGGCTGT TCCTCTCCTA CGACCTGCCG
CAGAGCGTCC TGCCCGGCAG CCTGCGGATC GGCGGCGGCG CCCGCTACGT CGGCTCGCGG
GAGGGCGACC TGGCGAACAG CTTCGAGCTG TCCGGCTATA CCACCTACGA CGCCTTCGCC
ACCTGGTCGC TGCCCGATGT GATCGGCAAG AAGGCCCAGG TGCAGTTGAA CGTCGACAAC
CTGACCAACA AGCGGTACTT CATTTCCAGC GGCGAAACCA GCAACCGGGT GTCCTGGGGC
GCGGTGCGCA CCGCGACGCT GTCGGCGAGC GTGGATTTCT GA
|
|---|
| Protein sequence | MPPRQTRRFR IPLTLAVPFV LSGVPALLYG AAASAAELRY YEIPAGPLAE RLNRFAAQAG
IHVAGDAALT AGKRSQPLDG TYEIEQALNI LLEGSGLQAV PTRTGGYEVR VLADGGAGMA
LDAISVNEVA EERTYRASTS AIGDKFETPF LEQSQTAYSV TRQVLDDFAV SDLEETVKFV
PGITVGNSFG GTQDSLVKRG FGNGVDGGVL RDGIRTARGR NFNSITTERV EVLKGPASLL
YGMQEPGGVI NVISKKPTYQ WRGTLGGQLS SEGGGSGYFD VSGPLGGSGF AFRLIGQHKD
EDYWRNFGVN RDKVVAPSLA FESEAFSATL SYEYSDYSSV LDRGAFLYDG HAVGDRDHRL
DEHWTRIEGH RQYASLALEY RFSPTSRLRF NYGWNQDDSS DFQADPNAYN PETGELRRRF
RSNPDIERSR NYAALDWLNE LELGGMRHEL TLGADHERHD ESNGFFHQGP NTWGFDPESP
HYGDLERTEI VNLGNSQQRS RVRMLSVYAK DNIHIGEHWI LSLGLRHQRF RQRDGQGIPY
QIGTNVNKIK NLPFAGLVYK VNDEFSLYAN YSESYKPNIV EAGTGVDGGS DPEEGRQYEI
GFRYDNGWLS GLVALFDIRK ENIQTTETVG GERFTRAVGE ARSRGLEASL NGQLGERWNV
IANYAYTDTK VLKDTEATED NELVNVAHNV AGLFLSYDLP QSVLPGSLRI GGGARYVGSR
EGDLANSFEL SGYTTYDAFA TWSLPDVIGK KAQVQLNVDN LTNKRYFISS GETSNRVSWG
AVRTATLSAS VDF
|
|---|
| |