Gene Avin_00620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00620 
Symbol 
ID7759029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp64166 
End bp64849 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID643802988 
ProductTranscriptional regulatory protein, TetR family 
Protein accessionYP_002797304 
Protein GI226942231 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCT CCCGCAAGCG CTCCGCCACG AACCGGACCC CCGCCCTCGC CGGCAAGGGG 
CGACAGCCCC GGGCCGACGG TGACGCCACC CGTATCGAGA TCATCGAGAC GGCCGGCCGC 
CTGTTCGCCG AGCGGGGCTA CCTCGGTACC ACCAGCAAAT CGATCTGCGA GCAGGCCGGC 
GTCAACATCG CGGCCATCAA CTACCACTTC GGCAGTCGCG ACGGGCTTTA CCTGGCCGTG 
CTCAAGGAGG TCCACCGCCG CTTCATGAGC ATGGAGTTCC TGCAGGAGCT TTCCGCCAGT 
ACCTTGCCGG CGGCCGACAA GCTGCACCAC TTCCTCGTCG AACTGGTCCG CCATGTCCTG 
GATGCCGACA ACTGGACGAT GCAGGTGTGG GCGCGCGAAA TACTGTCGCC CACGTCATTG 
CTGGAGAGAG TCTTCCAGGA GGAAACGCAG CCCAAGTTCG AGGTGCTCGC CACGATCGTC 
GGCGAGATCG CCGCCATCGC GCCCACGGAC CCGCGGATGC CGCGGCTGGT CCTCAGCGTG 
ATAGCGCCCT GCCTGGTCAT GCTGATCGTC GACCGCCGCT GCGCGACGCC GATCCAGCCG 
CTGTTCGCAC AGTCGCCTGC GACGCTGGCG GACGGTCTGT GGCGGTTCGC GATGGCCGGT 
CTGGCCGACC TGGAGCGCGC TTAG
 
Protein sequence
MPVSRKRSAT NRTPALAGKG RQPRADGDAT RIEIIETAGR LFAERGYLGT TSKSICEQAG 
VNIAAINYHF GSRDGLYLAV LKEVHRRFMS MEFLQELSAS TLPAADKLHH FLVELVRHVL 
DADNWTMQVW AREILSPTSL LERVFQEETQ PKFEVLATIV GEIAAIAPTD PRMPRLVLSV 
IAPCLVMLIV DRRCATPIQP LFAQSPATLA DGLWRFAMAG LADLERA