Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_00580 |
Symbol | |
ID | 7759025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 59016 |
End bp | 60125 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643802984 |
Product | ABC-2 type transport system permease protein |
Protein accession | YP_002797300 |
Protein GI | 226942227 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0449353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGACT ACCTGTATAG ACTCGCCAAC CTGTGCCGCA AGGAGTTCCT GGCGGTGCTC AAGGACCCGG CCAACCGGGT GATCCTGATC GCGCCGGTGA TCCTGCAGAC CCTGCTGTTC GGCTATGGCG CGACCTTCGA CCTGAACGAC GTGCCCTATG CGGTGCTCGA CCAGAGCCGC GGCGAGCTGT CGATGCGCCT GCTGGCGCGG CTGGACGGGA CCGGCAGGTT CCATCGCGTG GCCACGCTGC ATTCGCCGGC ACGGATCGCC GACCTCATCG ACGCCGGCGA CGCGCTGCTG GTGCTGCACT TCGCCGCGGA CTTCGACAGC CGCCTGAGCA GCCGGGGCAG CGCGCCGCTG CAGGTACTGC TGGACGGGCG CAACTCGACC ACGGCGGGCA ACGCCGCCGC GCAGATCCGC GAAGTGGTGG CGAATTTCAA CGCCACGCTG CCGGGAGTCG CCAGTCCTCC CGTCACGCTG GAGACACGCG CCTGGTTCAA CCCGAACCTG GAAACGCGCT GGAACATCCT GCCGGGCCTG ATCGCCTCGC TGAGCATGAT CCAGGTGATG ATGCTGGCGG CGCTGTCGGT GGCGCGCGAG CGCGAGCAGG GCACCTTCGA CCAGTTGCTG GTGACCCCGG TCTCGCCCAG CCAGATCATG ATCGGCAAGG CGTTGCCGGC CATCGTCATC GGCCTGCTGC AATCGGCCCT GGTGATGCTG ATTTCGATCC ATTGGTTCGA CGTGCCGATG GCCGGCGCGT GGCCGGCCCT GGCCGTCGGC CTGCTGGTGT TCACCGTCGC GGTGGTGGGG GTCGGGCTGT CGATCTCGGC GCTGTCGGCC AACATGCAGC AGGCGATGCT GTACACCTTC GTGCTGCTGG TGCCGCTGGT TCTGCTGTCG GGCCTGGCCA CCCCGGTGCG CAACATGCCC GAGGCGTTCC AGATCGCCAC GCATGCCAAC CCGCTGCGCT TCGCCATCGA CCTGGTGCGC CGGGTATATC TGGAAGGCGC GCCGCTGGAG CAGGTCTGGC GCGACTTCAT TCCCATGGTC TGTGTGGCGG CGCTGACCCT GCCGCTGGCC GCCTGGCTGT TCCGCAACCG GCTCGCCTGA
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Protein sequence | MIDYLYRLAN LCRKEFLAVL KDPANRVILI APVILQTLLF GYGATFDLND VPYAVLDQSR GELSMRLLAR LDGTGRFHRV ATLHSPARIA DLIDAGDALL VLHFAADFDS RLSSRGSAPL QVLLDGRNST TAGNAAAQIR EVVANFNATL PGVASPPVTL ETRAWFNPNL ETRWNILPGL IASLSMIQVM MLAALSVARE REQGTFDQLL VTPVSPSQIM IGKALPAIVI GLLQSALVML ISIHWFDVPM AGAWPALAVG LLVFTVAVVG VGLSISALSA NMQQAMLYTF VLLVPLVLLS GLATPVRNMP EAFQIATHAN PLRFAIDLVR RVYLEGAPLE QVWRDFIPMV CVAALTLPLA AWLFRNRLA
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