Gene Avin_00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00580 
Symbol 
ID7759025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp59016 
End bp60125 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID643802984 
ProductABC-2 type transport system permease protein 
Protein accessionYP_002797300 
Protein GI226942227 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0449353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGACT ACCTGTATAG ACTCGCCAAC CTGTGCCGCA AGGAGTTCCT GGCGGTGCTC 
AAGGACCCGG CCAACCGGGT GATCCTGATC GCGCCGGTGA TCCTGCAGAC CCTGCTGTTC
GGCTATGGCG CGACCTTCGA CCTGAACGAC GTGCCCTATG CGGTGCTCGA CCAGAGCCGC
GGCGAGCTGT CGATGCGCCT GCTGGCGCGG CTGGACGGGA CCGGCAGGTT CCATCGCGTG
GCCACGCTGC ATTCGCCGGC ACGGATCGCC GACCTCATCG ACGCCGGCGA CGCGCTGCTG
GTGCTGCACT TCGCCGCGGA CTTCGACAGC CGCCTGAGCA GCCGGGGCAG CGCGCCGCTG
CAGGTACTGC TGGACGGGCG CAACTCGACC ACGGCGGGCA ACGCCGCCGC GCAGATCCGC
GAAGTGGTGG CGAATTTCAA CGCCACGCTG CCGGGAGTCG CCAGTCCTCC CGTCACGCTG
GAGACACGCG CCTGGTTCAA CCCGAACCTG GAAACGCGCT GGAACATCCT GCCGGGCCTG
ATCGCCTCGC TGAGCATGAT CCAGGTGATG ATGCTGGCGG CGCTGTCGGT GGCGCGCGAG
CGCGAGCAGG GCACCTTCGA CCAGTTGCTG GTGACCCCGG TCTCGCCCAG CCAGATCATG
ATCGGCAAGG CGTTGCCGGC CATCGTCATC GGCCTGCTGC AATCGGCCCT GGTGATGCTG
ATTTCGATCC ATTGGTTCGA CGTGCCGATG GCCGGCGCGT GGCCGGCCCT GGCCGTCGGC
CTGCTGGTGT TCACCGTCGC GGTGGTGGGG GTCGGGCTGT CGATCTCGGC GCTGTCGGCC
AACATGCAGC AGGCGATGCT GTACACCTTC GTGCTGCTGG TGCCGCTGGT TCTGCTGTCG
GGCCTGGCCA CCCCGGTGCG CAACATGCCC GAGGCGTTCC AGATCGCCAC GCATGCCAAC
CCGCTGCGCT TCGCCATCGA CCTGGTGCGC CGGGTATATC TGGAAGGCGC GCCGCTGGAG
CAGGTCTGGC GCGACTTCAT TCCCATGGTC TGTGTGGCGG CGCTGACCCT GCCGCTGGCC
GCCTGGCTGT TCCGCAACCG GCTCGCCTGA
 
Protein sequence
MIDYLYRLAN LCRKEFLAVL KDPANRVILI APVILQTLLF GYGATFDLND VPYAVLDQSR 
GELSMRLLAR LDGTGRFHRV ATLHSPARIA DLIDAGDALL VLHFAADFDS RLSSRGSAPL
QVLLDGRNST TAGNAAAQIR EVVANFNATL PGVASPPVTL ETRAWFNPNL ETRWNILPGL
IASLSMIQVM MLAALSVARE REQGTFDQLL VTPVSPSQIM IGKALPAIVI GLLQSALVML
ISIHWFDVPM AGAWPALAVG LLVFTVAVVG VGLSISALSA NMQQAMLYTF VLLVPLVLLS
GLATPVRNMP EAFQIATHAN PLRFAIDLVR RVYLEGAPLE QVWRDFIPMV CVAALTLPLA
AWLFRNRLA