| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1563 |
|---|
| Symbol | |
|---|
| ID | 7411132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1516527 |
|---|
| End bp | 1517858 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 643718684 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002576114 |
|---|
| Protein GI | 222824540 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TACAAAATTT AGCACTTTCT TATTCACACA AAGCTATGCA AAAATCTTTA
GAAAATGGCT TTGATGTAAA ACTTTTAAAA AATGGACAAG AAAAAAAAGT AAATAAAGAA
AAAACTTATA TGCTCTATGC TCATGTGCCA TTTTGTCATA CTTTTTGCCC ATATTGTAGC
TTTCACAAAT ACTATTATGA TGAAAATTTA GCAAAGAAGT ATTTTGAAAG TTTAAGAGAA
GAAATTAAGC AAATTAAAGA TAAAGGGTTT GATTTTACTT CTATGTATGT TGGTGGTGGC
ACTACCTTAA TCAATGAAGA AGAGCTTGCT AAAACCTTAG AGCTTTGTAA AAAATTATTC
AACATCAAAG AAATTTCTTG TGAAAGCGAT CCAAATCATA TCGAACCTAA AAAACTTGAA
ATGTTTAAAG GACTTATAGA TCGTTTAAGT TGTGGCATAC AAAGTTTTGA TGATGATACT
TTAAAAAAAG TAGCAAGATA TCATAAATTT GGCTCAAGCA AAGAACTACA AGAAAAACTT
TCTAAAGCCA TAGGTGTGCT TCCTATCATG AGTATAGATT TGATTTTTAA TTTTCCAAGT
CAAACTAAAG AACAATTACT CAATGATTTA AAAATAGCCA AAAGCTTAAA ACCTCAACAA
ATCACAACTT ATCCTTTAAT GAAATCAAAT TTAACTAAAG ATAATATCGC AAAAACTTTA
GGAGTGAGTT TTAAGGATAA TGAGTTTGAA TTTTATAAAA TCATCATAGA TTTTTTCAAA
GATTATGAAA GAAACAATGC ATGGTCGTTT TCTTTAGAAA AAAGTAGTTT TAATGATGAG
TATGTAAGTA GCCATCATGA GTATTTAGGT GTGGGAAGTG GGGCTTTTAG CTTTTTAGAT
GGGGAGCTTT TAATCAATGC TTTTAACTTA AATGATTATT CCAAACTCAT CAAAGAAAAG
CAAAATGCAA ATATTGCTAA AGCTAATTTT AGTAAAAAAG AAATCATCAA ATATGTCTTT
TTAACTGAAA TGTTTACTGG CAAAATCGAA ATTGATAAAT TTAACAAAAC CTTAAAATGC
GATTTAGAAA AAGACCTTTT TATAGAGCTT TTAGGGCTTA AACTAAGCAA AGCTATAAAA
AAAGAAAATA ATACCTTATA CACAAGCGAA TTTGGGCGTT ATTTGTTTAT GGTTTTGATG
AAAGATTTTT ATACGGGTAT GGATTTAGTG CGAGCTGTAT TTAGAGATGA TAAACGCTTA
CAAGATAAAG AACGCATTAA TATCATGCAA GAAAATGTTG ATCCACTTAA TGCTGATAGC
ATGAAAATTT AA
|
|---|
| Protein sequence | MNFLQNLALS YSHKAMQKSL ENGFDVKLLK NGQEKKVNKE KTYMLYAHVP FCHTFCPYCS
FHKYYYDENL AKKYFESLRE EIKQIKDKGF DFTSMYVGGG TTLINEEELA KTLELCKKLF
NIKEISCESD PNHIEPKKLE MFKGLIDRLS CGIQSFDDDT LKKVARYHKF GSSKELQEKL
SKAIGVLPIM SIDLIFNFPS QTKEQLLNDL KIAKSLKPQQ ITTYPLMKSN LTKDNIAKTL
GVSFKDNEFE FYKIIIDFFK DYERNNAWSF SLEKSSFNDE YVSSHHEYLG VGSGAFSFLD
GELLINAFNL NDYSKLIKEK QNANIAKANF SKKEIIKYVF LTEMFTGKIE IDKFNKTLKC
DLEKDLFIEL LGLKLSKAIK KENNTLYTSE FGRYLFMVLM KDFYTGMDLV RAVFRDDKRL
QDKERINIMQ ENVDPLNADS MKI
|
|---|
| |