Gene Cla_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1530 
Symbol 
ID7411276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1481415 
End bp1484672 
Gene Length3258 bp 
Protein Length1085 aa 
Translation table11 
GC content29% 
IMG OID643718651 
Productconserved hypothetical protein, hemagglutination domain protein 
Protein accessionYP_002576085 
Protein GI222824511 
COG category 
COG ID 
TIGRFAM ID[TIGR01901] filamentous haemagglutinin family N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.307259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TAGCAAATCA TATAATACTT TCAGGTGTAA CTGTATCTAT GTTATTTTCT 
CCACTAATGG CCTTACCTAG TGGAGGTAAA TTTACTCATG GCACAAGTGG GACTATAACC
ACTAATGGTA ATAATATGAA TATTAGTGGA AATGGAATAA ACTCAGTTAT CCAATGGGGT
GGTGGATTTA ATATAGCAAA TGGAGAAAAG GTAAATTTTG GAGGTAAAGA CAAAAACTAC
CTAAATATTG CCCACGGTAC TAGTAAATCT ACCATAGCTG GTATATTAAA CGCAGGTGGT
AATAATGTAT TTTTAATCAA TCCTAATGGA GTAATCATTA CTAAAACAGG AACTATCAAT
GCTAATCGCT TTGTGGCTTC GACTTCATCG ATGAGTGATG GGGATATGAA AGCATTTGCT
AACTTAAAAA GCTTTGAAGA TGGTTTAAGC TTTTCCCCTG TATTTAAACC AAACAAAGCA
GGTAATGTGG TAAATATGGG TAATATTAAT GCTAAAAACA TTACTTTACA AGGTAATAAA
GTAATGTTAA GTGCTGATAC TAGTTGGGAT GATAAAAATA ATAAAATAAA ATTCAATCAA
ATCACAGCAG ATAATATAGA TTTAAAAGGT AATGAAATTT ATGTAGATAT TTCTACTATA
AATTCTAAAA ATCTAACTAC TGAAGCAAAA AATAAAGGAA TTGCTTATTT AAGTGCTACT
GGGTATTATT ATAATCCTAC AAGAAAATAC AATGAATTTA AAAATATAAA CAACAAAATC
AAAAAAACAT ACAATCAATA TATTAGCATA GGTTCTGATG TAGACTGGTG GCATTTTGCT
AAAGGGTGGA ATGAAAATGA AGATTTTAGA AACAATGTAG CGGAAGATAC CTTTAAACTG
ACTAATGATA TAGATTTTGG AGCTAATTGT AAAAATGGAG TATGTAGTGG ACAAAACTAT
GCAAATTACT GGGTAGATTT AAATGGTGAT GGTAAAAAAG ATGCTAATGA GTATACTAAT
ATGATGGTAG GTAGTGGTGA ATTTTTTACC AAAACCTTTG ATGGTCAAGG ATTTACGCTA
AAAAATATCA ATATAGATAT TACTAATTGG GGATCTGTTG GTATATTTGC AAGCGCATCA
TCTGGTGCTA ATTTTAAAAA TATCAATGTA GATTATATGG GTGGTGGAAT TAACGCAAAA
GGTACTAGAT GGGTCGGTGG ATTTATAGGA ACCTCTTATA TGCGTTTTGG TCCTTCGTTT
TCAAATATAT CTTTAAATAA AATAGGAAGT ATCAACAGTG GTGGTTCTGT TGGCCCTGTT
GGTGGTTTTG CTGGCTCGGC TTATAATAAT ACTTTTTCAA ATATATCCTT AAATGAAATA
GGAAATATTA GTGGTAATAG TAATTTTAAA TATGCTTTTT CTTCCATTGG TGGATTTGTT
GGTGAAAGCA TGGATAGTAC TTTTTCAAAT ATATCTTTGA ATAAAATAGG AAATATTAGT
GGTAATAGTG AAACAAATAC TATTTATGTT GGTGGATTTG TTGGTTATGC TAATGAAAAA
AATAATTTTT CAGATATCAT AATTAAAAAA ATAGAAAATA TCTCAAGCAT TTCTAACAAT
TGTTCGCACT CTGGTGGATT TGCAGGAGGA GGGCTTATGG GAGGAAAATT TGAACGAATT
TTCCTTGAAA ACATTGCTAA TATAAATAGT ACATCAAAAT CTAAAAGTGC TTATGCGGGA
GGATTTATTG GAAACAATAT ATCTTATTAT ACAACATACT ACAATGAAAA ATTTATTTTT
GATGTAAATA ATATTTCTTT AAAAGGGGTA TCAAATATTA CAAGTAAGGC CGAAAATGCT
TATGCGGGAG GATTTGCAGG ATTTTTTATT GAAAAAAGGA AGGTGGAAGA TTACGATGGT
AGTAAAAATG GTTATAGTTA TAAAATAAAT TTAAAAAATA TTTATATGTA TTTTGATGAG
GATGCAAAAA TCACAGCTAA TAATAATAAA AATAATTTTA CAGGTAAATT TTATGGTGGC
ATGGAAGATA TTAAAGAAAT AGCATTTGAT AATATCCACA TTTATTATAA AAAAGATACT
TTAACCAATG CAACAGCTGA TGATAAATAT CTAAATAAAC AAGACTTTAA TAAAAATGCT
AATAATGTTA ATAAAATTAA TGCATACGCT TATTCTGATA GTAATAAGGA ACAAGCGTAT
GAAAATTTTA TAAATCATGT TAATACTATC TCTAAACCTA TCTTTCCTAT AATACCACCA
TCCAAACCAT CACAAAATAC AGATTATATC CCTAACGCAG AAGATATTAT CAATAAAACA
GCTGTTTTAG ATGAAAATGA TTTACTTAAA GAAATGATTA AGAACGAAAT CATTGCTGAT
ATCACCAATG GAAAATATAA ATTACATATA AGTGATTTAT TAAAAATGCT AGAAGATAAA
ACAAATTATT CTAATATGAG TGAAAATCAA AAGATTGAAT TTATAGCCAA ATACTTTCTA
AGTGGTGATA AAACTAAAGC TTTAGAAGTA GTTCAAAGCT TAGATTTTCT TTTAGCTTAT
GAAAACAATG GTTTAAGCAC TGCTTCAGAA GATAAATTTG AAGGAAATGG TTTTGGTGTT
AAAAATGAAA TATTAAGCCA AGTAAATAAT ACAACCGAAA ATATCAAAGG CAAATTCAAT
CAACTAAAAG AGTTAGAACC TTTGGTGAAT AGTTCTAATA AATATCTAAA AGATCTTATT
ACTAAGCAAA ATGAGCTTGA TAATGCCATC AAAGCTTACA ATACTTATGT GGATTTAATC
AATAAAGGTT TTGCAAGCGC AGATGATAGA GAATTTATTA TTTTAAAAGA CCAAATAAAT
ACTCTAATGA AAGAGAGTCA AGTTTTAGCA GATTCAATCA ATGAAAATCA GGGAAAACTA
ATTGATTGGC AAAATAATAA CAATACAGAA AATTTCAAAG TAGTTGGTGC TTTTGCTAAT
GTAATATTAA ACACTAATCC TAAGTTAGAT CAAATCACAG GCAAGGGAGG AGATATAGAT
AACCCAAACA AACCAGAATT ACCTGAAACT GATATGGAGT TTGAACAAAC AGCTTCACTT
AATCTAATAG GCGATAATGC CATAGAAGAC AATGAAGGAA AAAAAGAAAT AGAGGAAACC
TCACTCGCAC AAAAAAATAA AACTTGCATA GTAAGTGATA ATTACAAAAC TATGAATCCT
TGTGTAGTGG GTATGTAA
 
Protein sequence
MKKLANHIIL SGVTVSMLFS PLMALPSGGK FTHGTSGTIT TNGNNMNISG NGINSVIQWG 
GGFNIANGEK VNFGGKDKNY LNIAHGTSKS TIAGILNAGG NNVFLINPNG VIITKTGTIN
ANRFVASTSS MSDGDMKAFA NLKSFEDGLS FSPVFKPNKA GNVVNMGNIN AKNITLQGNK
VMLSADTSWD DKNNKIKFNQ ITADNIDLKG NEIYVDISTI NSKNLTTEAK NKGIAYLSAT
GYYYNPTRKY NEFKNINNKI KKTYNQYISI GSDVDWWHFA KGWNENEDFR NNVAEDTFKL
TNDIDFGANC KNGVCSGQNY ANYWVDLNGD GKKDANEYTN MMVGSGEFFT KTFDGQGFTL
KNINIDITNW GSVGIFASAS SGANFKNINV DYMGGGINAK GTRWVGGFIG TSYMRFGPSF
SNISLNKIGS INSGGSVGPV GGFAGSAYNN TFSNISLNEI GNISGNSNFK YAFSSIGGFV
GESMDSTFSN ISLNKIGNIS GNSETNTIYV GGFVGYANEK NNFSDIIIKK IENISSISNN
CSHSGGFAGG GLMGGKFERI FLENIANINS TSKSKSAYAG GFIGNNISYY TTYYNEKFIF
DVNNISLKGV SNITSKAENA YAGGFAGFFI EKRKVEDYDG SKNGYSYKIN LKNIYMYFDE
DAKITANNNK NNFTGKFYGG MEDIKEIAFD NIHIYYKKDT LTNATADDKY LNKQDFNKNA
NNVNKINAYA YSDSNKEQAY ENFINHVNTI SKPIFPIIPP SKPSQNTDYI PNAEDIINKT
AVLDENDLLK EMIKNEIIAD ITNGKYKLHI SDLLKMLEDK TNYSNMSENQ KIEFIAKYFL
SGDKTKALEV VQSLDFLLAY ENNGLSTASE DKFEGNGFGV KNEILSQVNN TTENIKGKFN
QLKELEPLVN SSNKYLKDLI TKQNELDNAI KAYNTYVDLI NKGFASADDR EFIILKDQIN
TLMKESQVLA DSINENQGKL IDWQNNNNTE NFKVVGAFAN VILNTNPKLD QITGKGGDID
NPNKPELPET DMEFEQTASL NLIGDNAIED NEGKKEIEET SLAQKNKTCI VSDNYKTMNP
CVVGM