| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1506 |
|---|
| Symbol | |
|---|
| ID | 7411252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1455563 |
|---|
| End bp | 1456264 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643718628 |
|---|
| Product | conserved hypothetical integral membrane protein (UPF0005 domain protein) |
|---|
| Protein accession | YP_002576062 |
|---|
| Protein GI | 222824488 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.874501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTT ATGATAGAGA TTATTCTAAC TCTAAAACTC AAGAATTTGA AGGTTATGCT
AGAAGTGATT TAAGCATTTT TATAAAACAA ACTTATCAGC TTTTTGCTGC TTCATTATTA
GCTGCAACAG CGGGTGCTTA CATAGGAATT TTTGCCTTAG CACATCTTTT TGCGCAATCA
CAGGCAACTT TTTGGATTTT ATTTATTGTT GAAATTGGTT TATTGTTTGC ATTGCAATGG
AAAAAAAGAG AAGCTCCTTT AAATCTTATA TTGCTTTTTG GCTTTACTTT TTGTTCTGGG
CTTACTTTAA CACCACTTTT ATATTCAGTT TTAGCACTTC CTGCTGGCGC TAGCATTATA
GCCCAAGCTT TTGCCTTAAC AACAGTTGCA TTTGGGGCAC TAAGCATATT TGCTATGAAT
ACAAAAAAAG ATTTTACTAT GATGGGTAAA ATGTTATTTG TAGCTTTAAT TGTTATCGTA
GTAGCTTCTT TGATTAATTT ATTTTTCCAA AGCTCACTTT TAAGTTTAGC TATATCAGGA
ATTGGAGCGA TATTATTTTC ATTTTACATT CTTTATGATA CACAAAATAT CATAAGAGGA
AATTATGAAA CTCCAATCGA AGGTGCGGTT GCGCTTTATC TTGATTTTAT TAACCTTTTC
ATCTCTCTTC TTAATATTTT AAGAAGCTTT AATAGCAGAT AA
|
|---|
| Protein sequence | MSLYDRDYSN SKTQEFEGYA RSDLSIFIKQ TYQLFAASLL AATAGAYIGI FALAHLFAQS
QATFWILFIV EIGLLFALQW KKREAPLNLI LLFGFTFCSG LTLTPLLYSV LALPAGASII
AQAFALTTVA FGALSIFAMN TKKDFTMMGK MLFVALIVIV VASLINLFFQ SSLLSLAISG
IGAILFSFYI LYDTQNIIRG NYETPIEGAV ALYLDFINLF ISLLNILRSF NSR
|
|---|
| |