Gene Cla_1494 details

Gene Information

• Locus tag: Cla_1494
• Symbol: rnc
• ID: 7411240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1437353
• End bp: 1438021
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643718616
• Product: ribonuclease III
• Protein accession: YP_002576050
• Protein GI: 222824476
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAA AACTTCAAGA AAGATTAAAT TATCACTTTA AAAATGAACA ATTACTCATA 
GAGGCATTAA CGCATAAAAG TTACAAAAAG CCTTATAATA ACGAAAGATT AGAATTTTTA 
GGCGATGCAG TGATGGATTT AGTGGTAGGA GAGTTTTTAT TTTTTAAATT TCAAAAAGAA 
TCAGAAGGAA ATCTTTCCAA GCTCAGAGCA GCTTTAGTCA ATGAAAAATC TTTTGCAAAT 
TTAGCACAAA AGCTTGATCT TGGAGAGTGT ATATTTATGT CTATTGCAGA AGAAAATAAC 
GATGGACGCA ATAAGCCTTC TATACTTTCA GATGCTTTTG AAGCACTAAT GGGAGCTATG 
TATTTAGAAA TAGGTTTTGA AAAAACTAAA AATATAGCAT TAAATTTACT TAATGAAGTT 
TATCCACATA TTGACACACA AAGTTTGTTT AAAGATTATA AAACAAAATT GCAAGAAATC 
ACACAAGCAA ATATGGCAGG AACACCTGAG TATATAGTAG TTAATGCTTT TGGGCCTGAT 
CATAAAAAAC AATTTGAAAT TGCTATAAAA ATTCAAGGAA AAGAATTTGC AAGGGCCATA 
GCAGGCAGCA AAAAAGAAGC CCAGCAACAA TGTGCTAAAA TCGCACTTGA GAAATTAGGA 
AAACTATGA 

 

Protein sequence

MLKKLQERLN YHFKNEQLLI EALTHKSYKK PYNNERLEFL GDAVMDLVVG EFLFFKFQKE 
SEGNLSKLRA ALVNEKSFAN LAQKLDLGEC IFMSIAEENN DGRNKPSILS DAFEALMGAM 
YLEIGFEKTK NIALNLLNEV YPHIDTQSLF KDYKTKLQEI TQANMAGTPE YIVVNAFGPD 
HKKQFEIAIK IQGKEFARAI AGSKKEAQQQ CAKIALEKLG KL