| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1358 |
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| Symbol | fliF |
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| ID | 7409864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1308954 |
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| End bp | 1310639 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643718480 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002575925 |
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| Protein GI | 222824351 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA AAACTATACT GCACCAAGTA GGTCAGCTTT ATCAAAATTT AAGTTTAAGA
CAGCGTATTA TTATTGCTGC TTCTATTGTT GTTGTAGTTG GATTTTTAGT ATTTTTAACC
CTTTTTAGAA GCGGTTCTAC AGTAGCTAGT GAGGCTGGAT ATTCAGTATT GTTTGAAAAT
GCTAATACTA GTGATTCAGC GATGATAGTA ACGCAGCTTG AAAAAAGTGG AGTTCCTTAT
ATTTTGCGTA ATGAAGGAAC TATTTTAGTG CCTAATGATC AAGTATATAA ACAGCGTTTG
GCTATTGCTT CTGCAGGGTT ATTACCAAAG GATAATAAAG TAGGCTTTGA GCTTTTTGAT
AAACAAGAAT TTGGTGCAAC AGAAGCTGAG CAAAAGGTAA AATACCAAAG AGCATTAGAA
GGTGAACTTG CTAGAACGAT TGAAAGTTTA GAGCCTATCC ATAGTGCCAC AGTGCATATT
GCTTTTGCTA AAGATACACT TTTTACCCAA CAACAAGTCC CACCAACTGC TTCAGTAGCT
TTGACGATAA AAGAAGGTTT AAAGCTTAAT AAAAAGCAAA TTATGGGGAT TAAAAACTTA
ATTGCTTCTT CAGTGACAAA ACTTACCCCT GAAAATGTAA AAATCATGGA TCAAAAAGGT
ATTCCTTTAG ATGATGAGGG TGCTTTTGAG AGTGATTTGA TCGCTGCTCA AATTAAATAT
AAAAGAGATC AAGAATATGA ATTAGAGCAA AAAATTGTTG CTTCTATTGC TCTATTTGCG
GGTGGTTATG ATAGAGTAGT GGCAAAGGTT AGTATTGATT ATGATTTTTC TAAAGAAGAA
TCACAAAGTG AAGTATATGA TCCAAACACA GTCGTGCGTA GTGAGCAAAC TTTAGAAGAA
CACAAAGAAG GCTATAAAGA TAAAGAAATT CAAGGTGTAC CAGGTGCTGT TTCAAACATC
GGTCCTGTAG AGGGTTTAGA TGATAAAGGT GCACGCGAGG TTTATACTAA AAACCAAACT
ACAACTAATA ATGAAATTTC TAAAAAAATC ACCAACACCA CTAAGCAATT TGCAACGATT
AAAAGAATTT CTGCAGCCGT TGTAGTAGAT GGAAAATACA AAGTAATTAC TGATGATCAA
GGAAATATCA CAAACGAATA CATGCCTTTG AGCGATAAAG AAATTCAAGC TATTGAAAAT
CTTACTAAAG GTGCTATAGG TTTTAATCTT GCTAGAGGTG ATGCGGTTGA AGTAAATAAT
TTGGAATTTC ATAGAACAGC TAAGGTTGAA AATAAGGTCC AAACTTTCTA TTCAAGATTT
GTTGAGCCAT TTATCCCGCC TGTTAAGTAT GTCTTTGCCG CGATTTTACT TTTTATCTTT
TACAAAAAAG TTATCGTTCC ATTTTCACAA AAAATGCTTG CAGATATCAA GCTTGAAGAA
GAGATGGAAG GTAAAGACGG GCAAATCATT GATGAGGCTG AAGATGCTAT TGAAAAATTC
AATGCAGCGC GTAGAAAAGT TGAAGAACAA CTTGGCTTTG GGGATAATTT TGATGAAGAT
GCGCTTCAAT ATGATGTCTT GCTCGAAAAA TTAAGAGCAG TGGCTAATGA AAAAGGTGAA
GAAGTGGCAT TATTGTTGCA AAAACTTGTT GAAAATGAAG CTGAATTTGG TGAGAAGGAT
ATCTAA
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| Protein sequence | MDYKTILHQV GQLYQNLSLR QRIIIAASIV VVVGFLVFLT LFRSGSTVAS EAGYSVLFEN
ANTSDSAMIV TQLEKSGVPY ILRNEGTILV PNDQVYKQRL AIASAGLLPK DNKVGFELFD
KQEFGATEAE QKVKYQRALE GELARTIESL EPIHSATVHI AFAKDTLFTQ QQVPPTASVA
LTIKEGLKLN KKQIMGIKNL IASSVTKLTP ENVKIMDQKG IPLDDEGAFE SDLIAAQIKY
KRDQEYELEQ KIVASIALFA GGYDRVVAKV SIDYDFSKEE SQSEVYDPNT VVRSEQTLEE
HKEGYKDKEI QGVPGAVSNI GPVEGLDDKG AREVYTKNQT TTNNEISKKI TNTTKQFATI
KRISAAVVVD GKYKVITDDQ GNITNEYMPL SDKEIQAIEN LTKGAIGFNL ARGDAVEVNN
LEFHRTAKVE NKVQTFYSRF VEPFIPPVKY VFAAILLFIF YKKVIVPFSQ KMLADIKLEE
EMEGKDGQII DEAEDAIEKF NAARRKVEEQ LGFGDNFDED ALQYDVLLEK LRAVANEKGE
EVALLLQKLV ENEAEFGEKD I
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