| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1228 |
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| Symbol | ptmA |
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| ID | 7410392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1182642 |
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| End bp | 1183406 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 643718354 |
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| Product | flagellin modification protein A |
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| Protein accession | YP_002575800 |
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| Protein GI | 222824226 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000000472207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAAGG AAAAAGTAGT TTTTATAGCT GGTGCTTGCG GTAGGATAGG TAAGGCTTTA
AGTAGAGCGT GTTTGTATAA TAAAGCTAAG ATTATTATCG CTGATATAGA TGAAGAAAAA
TTAAAACAAT TAAAAAAAGA TTTAAATAAT GATGAAAATA TACTTTGTTT AAAACTTGAT
ATAAGTAATA AAGAACAAAT AAATCATTGT TTAAATGAAA GTGTTTTAAA ATTTAATAAA
ATAGATGCAT TCATAAATTG TGCTTATCCT TATGGAAAAG ATTGGGGGAA GGTTGCTTAT
TATGAGGCAA GTTATGAAAA AATTTGTGAA GATTTAAATT TGCATTTGGC TAGTTTTATA
TTTATAGCTT GTGAATTTGT GAAATTTTTT AAAAAACAAG GTTTTGGAAA TATTATAAAT
TTAAGCTCCA TTATGGGAGT TTATGCTCCA AAATTTGAAA ATTATGAAAA TACATCCATG
CAAAGTCCTT TAGAATATAG CGTCATAAAA GCAGGTATTA ATCATCTTGG AGTATGGCTT
GCAAAAGAAC TTTTTAATAC AAATATAAGA GTAAATTCTG TGGCTTTTGG TGGTATAAAA
GACAATCAAC CTGAAATTTT TTTAAATGCT TATAGAAAAT GTTGCGCATC AAAAGGAATG
CTAGATAGTG ATGATATATG CGGAACTTTG GTATTTTTGA TATCTGATAA TTCTAAATTT
ATAACAGGTC AGACTATAAT AGTAGATGAT GGATGGGGCT TATGA
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| Protein sequence | MLKEKVVFIA GACGRIGKAL SRACLYNKAK IIIADIDEEK LKQLKKDLNN DENILCLKLD
ISNKEQINHC LNESVLKFNK IDAFINCAYP YGKDWGKVAY YEASYEKICE DLNLHLASFI
FIACEFVKFF KKQGFGNIIN LSSIMGVYAP KFENYENTSM QSPLEYSVIK AGINHLGVWL
AKELFNTNIR VNSVAFGGIK DNQPEIFLNA YRKCCASKGM LDSDDICGTL VFLISDNSKF
ITGQTIIVDD GWGL
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