Gene Cla_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1170 
Symbol 
ID7410334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1120069 
End bp1122144 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content30% 
IMG OID643718296 
Productiron permease, FTR1 family 
Protein accessionYP_002575743 
Protein GI222824169 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.900718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAAAA AAATAAGCTT GTTGATAATT TTTTTATTTT GTACTATTGT TTATGCTAGA 
GAGATTGATT ATCAAAAAGA AGCCCAAGCA ATCAAACAAA TTTTAAATGA AAGTATGATT
TTGTACAAAG AAAATAAAAA TTTAGAAGCA AAGAAAAAAG CAGAAGATGC ATATTTTCAG
CATTTTGAAA CCATGGAAGG CTCTATTGGG CGTAATGTTG GTAGAAAAGC CATTGTTATG
GAGCGTAAAT TTGTTAATTT AAGAAAGTTA TATAAAGATA AAGAGGATTT TTCTAAAATA
GAAGCTTTGA TTAGTAGTTT GTATTTTGAT TTAGATGAAA TCATTCCTGT TTTAGAAAAA
GGCTTTCAGC TTAAAGCCGA AGCTAGTGAT GTAAATTATG ATAAAAAGGA GGCTGAAAAC
TCATCTTTAA AAGCAGAAAA AGAGCGCCAA GCACAAGCTG AAGCGATGTT TGCAGCTTTA
CTTGGAGAGA ATGTTAAAGA GCAAACTTCA CAAAACTCAG CTCAAAGTTT GATTGCTCAA
GAACAAAGCA CTCAAAAAGA TGAGGCATTG CTAGCTTTAC AAGAAGCTTC GGCTTTGGAT
GCAAGATTGC AATTTTTAAT GGATTCGATG GTTTCAAAGC TTGATCAAGC TGCGTTAGCT
TTTGTAAATA AAGACTATCA AAAAGCTAAA GATTTGATTC AATCATCATT GTTTGAAGAC
TATAGAAACT CAAAAGTAGA AGTTTTAGTG GCAAGATATA CTAAGGCAGG AGTGGATAAA
AAAATTCAAA CTAAACTTAG AACTATTATA AGAAAAATCA ATGCCAATAC TTTAGATGAA
AAAACTATTA GAGATGAAAT TTCAAACATA TCAGATTTAT TATATGAAGC GTTTTTAGCT
TTACCTAAAG AAGAATTAGC TTTACTTCAA GTTAAAGGCT TTGATGAGAG TGCTATGAGT
ACTAAAAACT ATACTAAAGT ATATGATGAT ATGAAAATTG CTCTTAATAA TATTTTGCAA
AATTACGAGG GATTTAGTTT AAATAGTATA GATGCTTTAC AAAATGTGTA TTTGGATATT
TTTGAAGCAA GTGGTATGGA AAGTAAAATT GGTGCTATTG ATAGTGCTTT AAAATTGAAA
ATAGAAAGTT ATTTTTCAAA AGGCGTTGCG CTTATTAAAG CAAGTGCTTC CAAAGAAGAA
TTAAAACAAA ATTTTGATGA GCTTAGTGCC TTAGTGGAAA GCTCTTTAGA TAAAATTCAA
GAATCCTCAC CTATGTCTTT ATTTATATGG GCTTTGGGTA TTATTTTAAG AGAAGGTTTG
GAAGCTTTAA TTATCATTGT GGCTATAGTT TCATATCTAG TTCAAAGTGG CAATAAAAAG
CGTTTAAATA TAGTATATTC AGCACTTTGG AGTGGTGTGT TTTTAAGTTT TGTAACAGCA
TTTTTTATTT CATGGATTTT TAAAGAACAA GCAGGGCAAA GCAGAGAGTT GCTAGAAGGC
ATTACTATGC TTGTGGCTGT TGCATTATTA TTTTATGTGG GTTTTTGGCT TTTATCAAAT
GCGCAAAATA AAAAATGGGC AAATCACATA AAAACTCAAG CGGTTGAAGC TATATCAAAT
AATTCAGCAA AAACCTTATG GTTTAGTGTA TTTTTAGCTG TATATAGAGA AGGTGCTGAA
ACTATTCTTT TTTATCAAGC TTTATTGTTT GATGCAAAAA CAAGCACAGA TTATAGTTTT
ATATTTATAG GATTAGCTAG CGGATTAATT ATACTTATCA TACTTTATTA TTTATTAAAA
GCTGGTGCTT TGAAAATACC AGTAAAACAA TTTTTCTATA TAACTTCATA CATTATTTTT
TACATGGTCT TTGTCTTTAC AGGCAAAGGC ATTGGTGAGC TCATAGAGGC TAAGCTTATT
ACACCAAGCC TACTTCCTTT TGATTTTGAA GGAATTTTAT GGCTTGGAAT TTATCCTTAT
TATGAGAGCA TCATACCTCA GTTTATGGTT TTAATCTTAC TCATTATGGG TATTTTTATA
ACAAAGCAAA TTTCAAATAA AAGGGAAAAA ATATGA
 
Protein sequence
MFKKISLLII FLFCTIVYAR EIDYQKEAQA IKQILNESMI LYKENKNLEA KKKAEDAYFQ 
HFETMEGSIG RNVGRKAIVM ERKFVNLRKL YKDKEDFSKI EALISSLYFD LDEIIPVLEK
GFQLKAEASD VNYDKKEAEN SSLKAEKERQ AQAEAMFAAL LGENVKEQTS QNSAQSLIAQ
EQSTQKDEAL LALQEASALD ARLQFLMDSM VSKLDQAALA FVNKDYQKAK DLIQSSLFED
YRNSKVEVLV ARYTKAGVDK KIQTKLRTII RKINANTLDE KTIRDEISNI SDLLYEAFLA
LPKEELALLQ VKGFDESAMS TKNYTKVYDD MKIALNNILQ NYEGFSLNSI DALQNVYLDI
FEASGMESKI GAIDSALKLK IESYFSKGVA LIKASASKEE LKQNFDELSA LVESSLDKIQ
ESSPMSLFIW ALGIILREGL EALIIIVAIV SYLVQSGNKK RLNIVYSALW SGVFLSFVTA
FFISWIFKEQ AGQSRELLEG ITMLVAVALL FYVGFWLLSN AQNKKWANHI KTQAVEAISN
NSAKTLWFSV FLAVYREGAE TILFYQALLF DAKTSTDYSF IFIGLASGLI ILIILYYLLK
AGALKIPVKQ FFYITSYIIF YMVFVFTGKG IGELIEAKLI TPSLLPFDFE GILWLGIYPY
YESIIPQFMV LILLIMGIFI TKQISNKREK I