| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1146 |
|---|
| Symbol | |
|---|
| ID | 7410880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1095550 |
|---|
| End bp | 1096152 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 643718272 |
|---|
| Product | thiamine-phosphate pyrophosphorylase/regulatory protein TenI, putative |
|---|
| Protein accession | YP_002575719 |
|---|
| Protein GI | 222824145 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.00092958 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGGTA AAAAAATCAT TGCTATTAGT GATAGTCAAA ATACTCAAGG AGATTTTTTA
AATTTTATTG AAAAACTAAG CCAAAGTAGT ATTGATGCTT TGGTGCTTAG AGAAAAACAT
TTAGATGAAT TAGGATATGC TAAATTAGCC AAAGAAGTAT TAAAAATTTT CAATAAAACT
CAAAAAATTT GCTTTTTACA TTATCATTAT GAAGTTTGTT TAAAATTAAA TCATTATTTT
TTTCATGCTC CTTTATTTAT TTTACAAAAT TACCCACAAA GCTATAAAAA ATTTGAGCTT
TTAGGCACTT CCATTCATTC TAAAGAAGAA TTAGATTTAG CTTATGAGCT TAAAGTAAAT
CATGCTTTTT TTGGGCATGT ATTTGAAAGC TCTTGTAAGG CTAATTTAAC TCCAAAAGGC
ATCAAGAATT TAAAAGATTT GTTAAAAGTT TCAAAAATAC CCATTTATGC CATAGGTGGG
ATAAATATCC AAACTATAAA TCACTTAAAA AAATTAAATT TAGCAGGCGT ATGTATAAGA
GAAGCTTTGT ATAAAAATAA CGATTTAAAT GAATATATTT TAAGTTGCAA GATGTATTTG
TAA
|
|---|
| Protein sequence | MWGKKIIAIS DSQNTQGDFL NFIEKLSQSS IDALVLREKH LDELGYAKLA KEVLKIFNKT
QKICFLHYHY EVCLKLNHYF FHAPLFILQN YPQSYKKFEL LGTSIHSKEE LDLAYELKVN
HAFFGHVFES SCKANLTPKG IKNLKDLLKV SKIPIYAIGG INIQTINHLK KLNLAGVCIR
EALYKNNDLN EYILSCKMYL
|
|---|
| |