Gene Cla_1099 details

Gene Information

• Locus tag: Cla_1099
• Symbol: ribE
• ID: 7410833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1054042
• End bp: 1054650
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 643718225
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_002575672
• Protein GI: 222824098
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 0.680954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAATG GATTAATCCG CGAATTAGCC TTTGTCAAAT CATATCAAAA CAACACTTTA 
AGATTAAAAG CAAGCTACAA ACCAAAACTA GGTGATAGCA TAGCAGTTAA TGGTGCATGT 
TTGAGTGTAA CAAAACTTTT TGATGATGGT TTTAATCTTG AACTTTCTTA TGAAACAAGA 
ACTCACATAG CTATTGAAAA TTTAAAAGAC TATGTACATA TTGAACCTGC ACTAGCTTAT 
GGCGATAGAA TAGATGGACA TTTAATGCAA GGACATATTG ATGGTATAGG TGAAATTACT 
AATATTTCTA AAAAAGAAAA CGGAGTTGAT TTTTATATTA AATGTCCTGA TGATATACAA 
ATTTATATGG CAAATAAAGC AAGTGTAGCC ATAGATGGAG TGAGCTTGAC TATCAATGAA 
GTCTTAAAAA ATGGTATTCG CTTAACTATC ATTCCTATAA CTTTTAATGA AACCTTGTTT 
AAAGATTACA CCATAGGAAG ACGCGTTAAT ATAGAAAGTG ATCTTTTAGC AAGATACATA 
CACAGACAAT TAAATTATAA AAAAGAAATT TCATGGCAAC AAATAGACAA GATTACATCA 
CTTTATTAG 

 

Protein sequence

MFNGLIRELA FVKSYQNNTL RLKASYKPKL GDSIAVNGAC LSVTKLFDDG FNLELSYETR 
THIAIENLKD YVHIEPALAY GDRIDGHLMQ GHIDGIGEIT NISKKENGVD FYIKCPDDIQ 
IYMANKASVA IDGVSLTINE VLKNGIRLTI IPITFNETLF KDYTIGRRVN IESDLLARYI 
HRQLNYKKEI SWQQIDKITS LY