Gene Cla_1092 details

Gene Information

• Locus tag: Cla_1092
• ID: 7410826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1046346
• End bp: 1046981
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 643718218
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_002575665
• Protein GI: 222824091
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTTT TAAAAGCGGA AAATTTAAGC CATAGTTTTG ATATTCCGCT TTTTAAAAAT 
TTAAATTTTA CTTTAAATAC AAAAGATTGT ATTGCAATAT GTGGAAGTAG TGGGTGCGGC 
AAATCCACTC TTTTACATAT TTTATCTACC TTATTAAAAC CTCAATCAGG AAAAGTTTTT 
TACAATAATC AGGATTTGTA TTCCTTAAAC GATGAAGCTT TGTTAGAAAT TCGTAGAAAA 
GATTTTGGGG TTATTTTTCA AATGCATTAT TTATTTAAAG GCTTTTTAGC TTTTGAAAAT 
ATAGAGCTTG CAAGTATTTT GAGTAAGCAA AATATCGATT ATGAGTTATT AAAAAAACTT 
GATATTGTTG ATTTAATGAA TCAAAAGATC ACAAAATTAA GCGGTGGACA ACAGCAACGA 
GTAAGTATAG CTAGAGTTTT AAGCAAAAGA CCAAAAATTA TTTTTGCTGA TGAGGCTACT 
GGTAATTTAG ATTTTAAAAA TGCTTTAAAT GTGTTAGATA TTTTGATTGA TTATGTTAAA 
GAAAATAATG CAGCCTTAGT TTTTGTGACT CACGACCAAG AACTTGCTAA AAAATGTGAT 
AGAATTTATC ATTTAAGTAA TTATGGAATT TGTTAA 

 

Protein sequence

MELLKAENLS HSFDIPLFKN LNFTLNTKDC IAICGSSGCG KSTLLHILST LLKPQSGKVF 
YNNQDLYSLN DEALLEIRRK DFGVIFQMHY LFKGFLAFEN IELASILSKQ NIDYELLKKL 
DIVDLMNQKI TKLSGGQQQR VSIARVLSKR PKIIFADEAT GNLDFKNALN VLDILIDYVK 
ENNAALVFVT HDQELAKKCD RIYHLSNYGI C