Gene Cla_1028 details

Gene Information

• Locus tag: Cla_1028
• Symbol: rpe
• ID: 7410762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 982247
• End bp: 982894
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643718154
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_002575601
• Protein GI: 222824027
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 0.198537
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGTAG CGCCAAGTTT ATTGTCTGCA AATTTTTTAA ATTTGGAAAA TGAGATTAAA 
GATGTGTGTG AAGCAGGGGC TGATTTGTTG CACATTGATG TGATGGATGG GCATTTTGTA 
CCAAATCTTA CTTTTGGTCC TTGTGTGATT GAAAATATTT CAAAAATTAC TTCAGTGCCT 
TTAGATGTGC ATTTAATGGT GCATAATGTT AGTAGTTTTG TAGATTTATT TATCCCAATA 
AAACCAAAAT TTATTAGCTT TCATATAGAA GCTGAAAATC ATCCTATTAG AGTGTGTGAG 
TATATAAGAA AAAATGGTAT TCATCCTGCC ATTGTTTTAA ATCCACATAC TCCAGTTTCA 
AGTATAGAAC ATATTTTAGA ATTTGTAGAT ATGGTGCTTT TAATGAGTGT TAATCCAGGC 
TTTGGTGGGC AAAATTTTTT ACCTTTAGTG TATGATAAGA TTCGACAGCT AAGAGAAATG 
ATAGATAGGA AAAATCTTAA AGTCTTTATA GAAGTAGATG GTGGGGTAAA TGGTTTAAAT 
GCGCCTGATT TAGATGAAGC AGGAGCTGAT ATTTTAGTCG CAGGTAGTTA TATCTTTTCC 
TCGCAAGATA AAAAAACAGC AATTAATTCT TTAAAGCTTG AATTTTGA 

 

Protein sequence

MYVAPSLLSA NFLNLENEIK DVCEAGADLL HIDVMDGHFV PNLTFGPCVI ENISKITSVP 
LDVHLMVHNV SSFVDLFIPI KPKFISFHIE AENHPIRVCE YIRKNGIHPA IVLNPHTPVS 
SIEHILEFVD MVLLMSVNPG FGGQNFLPLV YDKIRQLREM IDRKNLKVFI EVDGGVNGLN 
APDLDEAGAD ILVAGSYIFS SQDKKTAINS LKLEF