| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1005 |
|---|
| Symbol | |
|---|
| ID | 7410740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 957819 |
|---|
| End bp | 959075 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643718132 |
|---|
| Product | peptidase, U32 family |
|---|
| Protein accession | YP_002575579 |
|---|
| Protein GI | 222824005 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.683549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTC CTGAAATAGT AGCTCCTGCA GGAAATTTCA CAAAATTAAA AATAGCATTA
GCTTATGGAG CTGATGCTGT TTATGCGGGA GTTAGCAACT TTTCATTAAG AGCAAGAACT
GCAAGAGATT TTAATTATGA AACTTTTAAA GAGGCTATTG ATTATACTCA TGCAAGAGGA
AAAAAAATTT ATGTAACCAT TAATGGTTTT CATTTTAGCT CGCAAATTGA AGGGTTAAAA
AGACATATTT TAAAATTAAA AGAAATGAAA CCTGATGCTT TTATAGTAGC TTCAGTTGGT
GCTATGCGTT TGGTAAAAGA ACTTGCACCT GAAATTAATC TTCATGTATC CACTCAAGCA
AATATTTTAA ATTATTTAGA TGCTCAAGTT TATAAAGACA TGGGTGCAAA GCGTGTTGTT
ATAGCAAGGG AGCTTGGTTT AAAAGATGCA AAAGATTTAA AAAATAATTG TGATATCGAG
CTTGAAAGTT TTGTGCATGG TTCTATGTGC TTTGCATATT CTGGTAGATG TTTGATAAGC
TCAGTGCAAA GTGGACGCAT GAGTAATCGC GGCTCTTGTG CAAATGATTG TAGATTTAAT
TATGAATTAT ACGCTAAAAA TCCAGAAACC AATACACTTT TTAGATTAGA AGAAGATGAA
AATGGCACAC ATGTATTTAA TTCTAAAGAT TTAAATTTAA GTTCATATAT ACAAAAAATT
ATGCAAGAAA ATTGTATTCA TGCTTTTAAA ATTGAAGGAA GAACAAAAAG TGAATACTAT
GTGGCTTTGA CTACAAGAAC TTATAAAATG GCAGTAGAGG ATGTATTGCA AAATACTTTT
GATGCGAGTA AATATGAAAA AGAAATCCAT ACTTTAAAAC ATAGAGGTTT TACGGATGGA
TATTTAGTCT CAAGGGCATA TGAAAAAACT GATTCAATTA ACCATAATAC AAGCATAGAA
GAAGGTACGC ATCAAGTGCA TGCTATTAGT GAAGATGGTG AGTTTTTTAA ATGCAAAGGT
AAAATAGAGC TAGGAAAAGA ATATGAAATT TTAGCTCCAG TTAATTCTAA TATAGAATTA
GGAGAAAATA AGCTAGGGAT GATTTATGAA AACGAAGGAA AGAAATTTAT AGTTTTTAAG
CAATTACTAG CCAAAAATAA TAAAGAATTT AATGAAATTC ACAGCGGTAA TGAAAATGAA
ATTGCTTTAC CGTTTAAGCT TCCAGAATTT AGCTTTTTAA GAAGGAGTGT TGAATGA
|
|---|
| Protein sequence | MIIPEIVAPA GNFTKLKIAL AYGADAVYAG VSNFSLRART ARDFNYETFK EAIDYTHARG
KKIYVTINGF HFSSQIEGLK RHILKLKEMK PDAFIVASVG AMRLVKELAP EINLHVSTQA
NILNYLDAQV YKDMGAKRVV IARELGLKDA KDLKNNCDIE LESFVHGSMC FAYSGRCLIS
SVQSGRMSNR GSCANDCRFN YELYAKNPET NTLFRLEEDE NGTHVFNSKD LNLSSYIQKI
MQENCIHAFK IEGRTKSEYY VALTTRTYKM AVEDVLQNTF DASKYEKEIH TLKHRGFTDG
YLVSRAYEKT DSINHNTSIE EGTHQVHAIS EDGEFFKCKG KIELGKEYEI LAPVNSNIEL
GENKLGMIYE NEGKKFIVFK QLLAKNNKEF NEIHSGNENE IALPFKLPEF SFLRRSVE
|
|---|
| |