| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0986 |
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| Symbol | cmeD |
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| ID | 7410721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 941981 |
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| End bp | 943237 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718113 |
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| Product | outer membrane component of efflux system |
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| Protein accession | YP_002575560 |
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| Protein GI | 222823986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.942426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TATATTTACT TTTCTTGCCC TTATTTTTGC TAGCTAATAA TCTTAAAGAA
TTTATAGATT TAAGTTTAAA CAATGAAAAT TACTTACAAA AGCAACTCCA ATTTTCAAAA
AGTATTTTAG AGCAAGAAAG TGTGCAAAAT GCTTATTTAC CAAGTTTACA TTTAGGTGTT
TCTTATCTTG GCTCAAACAA AGATCGCTTT ATCATAGAAC CCCAAGAAAG TCTAATGAGT
ACTCTTTCGC TTAAATTTTT ACTTTTTGAT GGGGGCAATA GAGAAGCAAA AATCGCTAGC
ATGCAAAGTC TAAAGCAACT TGCTCATCTT GAAAAAGAAA ACATGGCAAA TTATATGGCG
CTTAGTGCTA GTGTTTTGTA TTTTAATTAT CTTAGTTTAG AAAGTATTAT AGCAAGTGAT
AAACAAAAAG AAATCACTCT ACAAAATCAA CTCAAGCGCT TAGAAAATTT TTACCAAGCT
GGACTTGCTA GCCAAAGTGA ACTTGAGAGC ATAAGAGCAA AATTTGAGTT AAGCTCTTAT
GAATTAGCTC AAAATGAATT AAAACTATAT GAATTAAAAA ATGAAATTTA TAATCTTAGC
AAAACACACT TTATTCCTTC TTTTCAAAAT ATTTTACAAG AACCAAGTGC AGAAAAAAAC
AAAAGCTATG AAATAGCCCT TATGCAAGAA AAATTGAATT TAGAAAATTT AAAAATAGAC
TCTGCTAGAG CTGAGTTGTT TCCAAAAATA TTTTTACAAA ATAGTTTTAG TTTTTATGAT
ATGAACTATA ATCCTAAATT ACCGTATGAG CTAAAATCAA TAAGCGAAAG CTTTTTAAAA
GAACATGGAC AAAGCAATCG TTTTATTTTA GCTTTTGAGT GGAAAATTTT TGATTTTGGT
GCTAATCAAA AAGCCCTAGA AGCTCAAAAA TATACAAGCA AAATCACTCA ATTAGAACTT
GAAAAAACCA AAAGAAAAGT AGACATAGAA CTAGATAATC TTTTACAAGA AATTGAAATT
TCTAAAGTTA AAATAAAAGC ATTAAATGCA AGTTTTAAAG CAGCCAATTT AGCTTTTGAG
GCTATTGAGA AAAAATACAC CGCAGGGCTT TGCTCATATG TAGAATACCT AAATGCATTA
GAATTAAAAT ACAAAAGTCA AAGTCAGCTT GAACTAGCTA AAAATGAATA TGAAATCACA
AAAGCAAGGT ATTATTTTAC AGCTGGAATT GATATAAAAA CAAAGGTTTT AGAATGA
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| Protein sequence | MKILYLLFLP LFLLANNLKE FIDLSLNNEN YLQKQLQFSK SILEQESVQN AYLPSLHLGV
SYLGSNKDRF IIEPQESLMS TLSLKFLLFD GGNREAKIAS MQSLKQLAHL EKENMANYMA
LSASVLYFNY LSLESIIASD KQKEITLQNQ LKRLENFYQA GLASQSELES IRAKFELSSY
ELAQNELKLY ELKNEIYNLS KTHFIPSFQN ILQEPSAEKN KSYEIALMQE KLNLENLKID
SARAELFPKI FLQNSFSFYD MNYNPKLPYE LKSISESFLK EHGQSNRFIL AFEWKIFDFG
ANQKALEAQK YTSKITQLEL EKTKRKVDIE LDNLLQEIEI SKVKIKALNA SFKAANLAFE
AIEKKYTAGL CSYVEYLNAL ELKYKSQSQL ELAKNEYEIT KARYYFTAGI DIKTKVLE
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