Gene Cla_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0960 
Symbol 
ID7410540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand+ 
Start bp916596 
End bp917252 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content28% 
IMG OID643718088 
Productconserved hypothetical lipoprotein 
Protein accessionYP_002575535 
Protein GI222823961 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.490847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TTTTTATTTT TTCACTTATT ATTGCAGGGC TATTTTTAGG AGCATGCAGC 
TCAAAAAAAG CCGAAGATTT GTATAATCTA AGCTCTATGG AATGGTATCA ACAAATTATA 
AAAGATTTAC AAGAAAAAAA TCTTGAAGCA GCTGATAAAC ATTATACTTC AATGGCAGCT 
GAACATATAG CTGATCCATT ATTAGAACAA ACTTTACTTA TATTAGCTCA AGCTCACATT 
AGTGAAGAAG AATATGAAAT GGCAAATTTT TATCTTGATG AATACTTAAA TAAATTTGGC 
GATTCACAAA ATGTAGCTTA TATAAGATAT TTAAAAATCA AAGCCAAATT TGACTCTTTT 
GCTGTTCCAA ATCGTAATCA AGCGCTAATG CTAAAAACAA TAGAAGAAAT CAAAGAATAC 
AATCAAAGCT ATCCTAATGT GCAATATAAT GATTTAATTG ACACCATGCT TACTAAATTT 
AATCTTGCAG TTTTTTATCT TGATACCAGC ATAGCAGAAT TATATCAGAA AAAAAATAGA 
GAGCAAAGCT ATGAGATTTA TAAGCAAAAA ATAGAAAATT CCGATTTTAA TAAAATTGAT 
ATGATTAAAC CAGAACTTCC TTGGTATAGA AAAATATTTG AAGAAGGTAT AATGTAA
 
Protein sequence
MKKLFIFSLI IAGLFLGACS SKKAEDLYNL SSMEWYQQII KDLQEKNLEA ADKHYTSMAA 
EHIADPLLEQ TLLILAQAHI SEEEYEMANF YLDEYLNKFG DSQNVAYIRY LKIKAKFDSF 
AVPNRNQALM LKTIEEIKEY NQSYPNVQYN DLIDTMLTKF NLAVFYLDTS IAELYQKKNR 
EQSYEIYKQK IENSDFNKID MIKPELPWYR KIFEEGIM