Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0877 |
Symbol | |
ID | 7410457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 832604 |
End bp | 834526 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 643718007 |
Product | conserved hypothetical protein, putative ATPase, AAA family |
Protein accession | YP_002575454 |
Protein GI | 222823880 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.144041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAACAA ATACTTCTAC CCTTACTCAC ATTGCGGATT TTGATTATTA CTCACATAAT GTAAAAGTCA TCTCACTACA CGCACAAATG CTCTCGCATA ATAAGCAAAT AAAAAAAGAT TTTTATAGCG AATTTGAAGA TATATTAAAT AAAGATAGCA AAATTCCTAG TTTTATTTAT AAAAAGTATT CTAAATTTAT TCTTCCTGAT TTTTTAAAGA AAAACTTAAA TTATCTAAAA AAATATTTAA ATTTTAGCCA AGCAGAATGT GATGTGTTTG TATTTTTTTA CTATGCAAAC AAAGGTCGTT TTGCCCTACA TCAAGGATAT AGCACTGTTT TAGGTAAAAA AATTATAGAA AAAATTTTCA ACCTTACTTC AAAAGATATC AACAAAGCTT TAAGCGATGA TTCTATGCTT TTTAAGCTTG ATGCTTTGTG TTATTATGAT AGCGATGCAT TTGGTATAGA TATAAAAAAT TTTGAAAATA TTTTTACACA AGATATTAGC AAAACCACAC TTATGAGCGA ATTTTCGTAT TTTTTACCAA AAACTAGACT AAATTTGAGT GATTTTGACT ATATACAAGA GGAATTTAAT ACCATCGCTA CTTTTTTAAA AAAATCTCAA AAGGGGAATA TTTTTATATA CGGAAAAGCA GGTGTAGGTA AAAACGAGCT TAGTGCGCTC ATAGCTAAAG AGCTTGGAAA AGAAGCATTG TGCGTTAAAG ATTGTGAAGA TGTAAAAAAA TCAAATAGAA TTTCAAATTT TTATGCACTA AAAAAGATTA TTAATCCCAA AAAACAAATG ATAATTTTTG ATGAGTGTGA AGATAGTCTT TGCTATGATT CTTTAAAAGA AAAAATTAGA ATTAATAAAA TCTTAGATGA AGAAAATGGC ATATGTGTGT TTTTATCAAA TTCTAATGAG ATGGATGAGG CGTATTTAAG ACGCTTTGAT ATGATTTTAG AGCTTGAATG CATGCCAAAA GAAAAGAAAA TTCAAAATAT AAAAAAATTA TTTGCCAAAA AAAGATTAAA AATAGATGAG GCGATTATAG AAAGCATAGC TTCTCACCCT GAACTTTCTC AAGGGGTGAT ATTAAAATGT GCAAACAATG CTAAGATCTT TAAAAACAAA AGCCAAGAAG TGTTTGTAAG GTTGATCAAT GAGAATTTAA AAGCAAGATC TCTTCACACA ATTTCAATGC CAAAAAAAGA TAAAAAATAT GATTTAAATT TAATAGAATG TGATTTAAAT TTACAAGAGC TGATAAATAA TATCAATGAA AACTCAAGTT TGAGAATTTT AAGCTATGGT ATAGCAGGTA GTGGAAAAAG CGAGTTTGGC AAAGAACTAG CTAATGTTTT AAACAAAACT TTACATTCTT ATAAGCTTAG TGATATTTTA GATCCTTTTG TGGGAAATAA TGAAAAAAAT ATCGCAAATA TTTTCAAAAA AGCCTCTAAA GATAATGCTA TCTTGCAACT TGATGAAATC GATGCGTTAA TTTATAGCAG AGATGAGGCA AATAAAAGTT GGGAAAAAAG CCTAGTCAAT GAAATGCTTA TGCAAATGGA AAATTTTGAA GGCATTTTCA TAGCTTCAAC AAATTACCTA CAAAGCCTTG ATAAAGCTAG CATAAGAAGA TTTGATCTAA AGATTGAATT TCAAGCATTA AAACAAGAAA AACTTTTAAA AGCTTTTGAA TTTTTTGCTA AAGAATTAAA TTTAAGCTTT GATAAAAAGC AAATTACAAA AAGACTCTTA AGACTTCAAA ACATTTGTTT GGGCGATTTT GCGCTAATTC TTAGACAAAA TAAAATTTTT AAAATCAAAA ATATTGATGA GTTTTTAGAA AAATTAGAAA AAGAATCAAA ACTCAAATTA GATGATGAAA AAATCAACAT GGGGTTTTTA TAA
|
Protein sequence | MQTNTSTLTH IADFDYYSHN VKVISLHAQM LSHNKQIKKD FYSEFEDILN KDSKIPSFIY KKYSKFILPD FLKKNLNYLK KYLNFSQAEC DVFVFFYYAN KGRFALHQGY STVLGKKIIE KIFNLTSKDI NKALSDDSML FKLDALCYYD SDAFGIDIKN FENIFTQDIS KTTLMSEFSY FLPKTRLNLS DFDYIQEEFN TIATFLKKSQ KGNIFIYGKA GVGKNELSAL IAKELGKEAL CVKDCEDVKK SNRISNFYAL KKIINPKKQM IIFDECEDSL CYDSLKEKIR INKILDEENG ICVFLSNSNE MDEAYLRRFD MILELECMPK EKKIQNIKKL FAKKRLKIDE AIIESIASHP ELSQGVILKC ANNAKIFKNK SQEVFVRLIN ENLKARSLHT ISMPKKDKKY DLNLIECDLN LQELINNINE NSSLRILSYG IAGSGKSEFG KELANVLNKT LHSYKLSDIL DPFVGNNEKN IANIFKKASK DNAILQLDEI DALIYSRDEA NKSWEKSLVN EMLMQMENFE GIFIASTNYL QSLDKASIRR FDLKIEFQAL KQEKLLKAFE FFAKELNLSF DKKQITKRLL RLQNICLGDF ALILRQNKIF KIKNIDEFLE KLEKESKLKL DDEKINMGFL
|
| |