Gene Cla_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0877 
Symbol 
ID7410457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp832604 
End bp834526 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content27% 
IMG OID643718007 
Productconserved hypothetical protein, putative ATPase, AAA family 
Protein accessionYP_002575454 
Protein GI222823880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.144041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAA ATACTTCTAC CCTTACTCAC ATTGCGGATT TTGATTATTA CTCACATAAT 
GTAAAAGTCA TCTCACTACA CGCACAAATG CTCTCGCATA ATAAGCAAAT AAAAAAAGAT
TTTTATAGCG AATTTGAAGA TATATTAAAT AAAGATAGCA AAATTCCTAG TTTTATTTAT
AAAAAGTATT CTAAATTTAT TCTTCCTGAT TTTTTAAAGA AAAACTTAAA TTATCTAAAA
AAATATTTAA ATTTTAGCCA AGCAGAATGT GATGTGTTTG TATTTTTTTA CTATGCAAAC
AAAGGTCGTT TTGCCCTACA TCAAGGATAT AGCACTGTTT TAGGTAAAAA AATTATAGAA
AAAATTTTCA ACCTTACTTC AAAAGATATC AACAAAGCTT TAAGCGATGA TTCTATGCTT
TTTAAGCTTG ATGCTTTGTG TTATTATGAT AGCGATGCAT TTGGTATAGA TATAAAAAAT
TTTGAAAATA TTTTTACACA AGATATTAGC AAAACCACAC TTATGAGCGA ATTTTCGTAT
TTTTTACCAA AAACTAGACT AAATTTGAGT GATTTTGACT ATATACAAGA GGAATTTAAT
ACCATCGCTA CTTTTTTAAA AAAATCTCAA AAGGGGAATA TTTTTATATA CGGAAAAGCA
GGTGTAGGTA AAAACGAGCT TAGTGCGCTC ATAGCTAAAG AGCTTGGAAA AGAAGCATTG
TGCGTTAAAG ATTGTGAAGA TGTAAAAAAA TCAAATAGAA TTTCAAATTT TTATGCACTA
AAAAAGATTA TTAATCCCAA AAAACAAATG ATAATTTTTG ATGAGTGTGA AGATAGTCTT
TGCTATGATT CTTTAAAAGA AAAAATTAGA ATTAATAAAA TCTTAGATGA AGAAAATGGC
ATATGTGTGT TTTTATCAAA TTCTAATGAG ATGGATGAGG CGTATTTAAG ACGCTTTGAT
ATGATTTTAG AGCTTGAATG CATGCCAAAA GAAAAGAAAA TTCAAAATAT AAAAAAATTA
TTTGCCAAAA AAAGATTAAA AATAGATGAG GCGATTATAG AAAGCATAGC TTCTCACCCT
GAACTTTCTC AAGGGGTGAT ATTAAAATGT GCAAACAATG CTAAGATCTT TAAAAACAAA
AGCCAAGAAG TGTTTGTAAG GTTGATCAAT GAGAATTTAA AAGCAAGATC TCTTCACACA
ATTTCAATGC CAAAAAAAGA TAAAAAATAT GATTTAAATT TAATAGAATG TGATTTAAAT
TTACAAGAGC TGATAAATAA TATCAATGAA AACTCAAGTT TGAGAATTTT AAGCTATGGT
ATAGCAGGTA GTGGAAAAAG CGAGTTTGGC AAAGAACTAG CTAATGTTTT AAACAAAACT
TTACATTCTT ATAAGCTTAG TGATATTTTA GATCCTTTTG TGGGAAATAA TGAAAAAAAT
ATCGCAAATA TTTTCAAAAA AGCCTCTAAA GATAATGCTA TCTTGCAACT TGATGAAATC
GATGCGTTAA TTTATAGCAG AGATGAGGCA AATAAAAGTT GGGAAAAAAG CCTAGTCAAT
GAAATGCTTA TGCAAATGGA AAATTTTGAA GGCATTTTCA TAGCTTCAAC AAATTACCTA
CAAAGCCTTG ATAAAGCTAG CATAAGAAGA TTTGATCTAA AGATTGAATT TCAAGCATTA
AAACAAGAAA AACTTTTAAA AGCTTTTGAA TTTTTTGCTA AAGAATTAAA TTTAAGCTTT
GATAAAAAGC AAATTACAAA AAGACTCTTA AGACTTCAAA ACATTTGTTT GGGCGATTTT
GCGCTAATTC TTAGACAAAA TAAAATTTTT AAAATCAAAA ATATTGATGA GTTTTTAGAA
AAATTAGAAA AAGAATCAAA ACTCAAATTA GATGATGAAA AAATCAACAT GGGGTTTTTA
TAA
 
Protein sequence
MQTNTSTLTH IADFDYYSHN VKVISLHAQM LSHNKQIKKD FYSEFEDILN KDSKIPSFIY 
KKYSKFILPD FLKKNLNYLK KYLNFSQAEC DVFVFFYYAN KGRFALHQGY STVLGKKIIE
KIFNLTSKDI NKALSDDSML FKLDALCYYD SDAFGIDIKN FENIFTQDIS KTTLMSEFSY
FLPKTRLNLS DFDYIQEEFN TIATFLKKSQ KGNIFIYGKA GVGKNELSAL IAKELGKEAL
CVKDCEDVKK SNRISNFYAL KKIINPKKQM IIFDECEDSL CYDSLKEKIR INKILDEENG
ICVFLSNSNE MDEAYLRRFD MILELECMPK EKKIQNIKKL FAKKRLKIDE AIIESIASHP
ELSQGVILKC ANNAKIFKNK SQEVFVRLIN ENLKARSLHT ISMPKKDKKY DLNLIECDLN
LQELINNINE NSSLRILSYG IAGSGKSEFG KELANVLNKT LHSYKLSDIL DPFVGNNEKN
IANIFKKASK DNAILQLDEI DALIYSRDEA NKSWEKSLVN EMLMQMENFE GIFIASTNYL
QSLDKASIRR FDLKIEFQAL KQEKLLKAFE FFAKELNLSF DKKQITKRLL RLQNICLGDF
ALILRQNKIF KIKNIDEFLE KLEKESKLKL DDEKINMGFL