| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0795 |
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| Symbol | |
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| ID | 7410129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 755036 |
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| End bp | 756352 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643717925 |
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| Product | conserved hypothetical integral membrane protein, MATE family efflux protein |
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| Protein accession | YP_002575373 |
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| Protein GI | 222823799 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.472325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCA AACAACTTTC ACTTAAACAT CTTAGTATGC CTATATTACT TGAAATGTTT
TTAAGGTATT TTTCTTTGAT TATTAATACC GTGATGGTTT CGCAGTATTC TAACTTTTTA
GTTGGAGCTA TGGGTGCGGG TAATCAAGTA GCAGATTTAT TTATCATTAT TTTTAGTTTT
TTAAGTGTGG GTTGTAGTGT AGTGATCGCT CAAGCTTTAG GGGCTAAAGA TTACACTCTA
GCAAGAAAGG CAATTCACCA AAGTCTATTT TTAAATGCCT TGCTTGGTTT TGTGTGTGGA
AGTTTGATTT TATGGCATGG AGAGTTTTTA CTCTATCTTT TACAAATTCC AAATGAGCTT
TTAAAAGATA GTGCAATTTA CTTACATATG CTTGGAATTT GTTTGTTTTT TGATGCTATG
GGCATAGTTT TGGCTGCTAT TATTAGGGTG TATAATATGG CTTATTGGGT TATGTTTACT
ACCTTATTGA TGAATATTGT GATATTTATA GGGAATTTTT ATGTATTGCA TTTTACTAAG
CTAGAACTTT TTGGAGTAGG GCTTAGTAAT ATACTTGGGC GCTTGGTAGC CTTTAGCATG
CTTATAGCAA TACTTAGTTT TAAGCTCAAA ATTCATCTTA AAATTAAAGA GATGATAAAC
CTTGAAAAAT CTGTGTTTAA AAAGATTTTT AATATCGGCG GTTTTGCAGC AGGAGAGCAT
TTGATATGGT TTATACAATA CACCATAGCT TTTGCTTTTG TAGCAAGCTT GGGTAAAGAA
AATTTAAGCG TTCAAACGAT TTATTTTCAA ATTTCTTTGC TTATCATGCT AGTAGGACAA
GCCATAAGCG TGGCAAATGA AATCATTATA GGTAAGTTAG TCGGCGCTAA ATACTTAAAT
GTGGCCTATA AACATACTTG GATAGCTTTG TATTTTAGCG TGGTAGCAAG TGCTTTTGTA
GCTTTGCTTA ATTATGTTTT ACAAGATTTT ACTATGGGTG TAGTAAAGCT TGAAGAGAGT
TTAAAAGAAC TTATGATACC ACTTTTTACT CTTTCAATTT TCTTAGAAAT TTCAAGAACT
TTTAATATAG TCATGGTGAA TTCACTAAGA GCAAGTGGTG ATGCGAGGTT TCCGTTTTTA
AGTGGAGTGG TATTTATGCT TGGAGTTTCT TTACCAGTTG GTTATGTGCT TTGTTTTTAT
GCTGGACTTG GAATTTTAGG AGTTTGGATA GGTTTTTGTG CAGATGAGTT TTTACGCGGT
ATAGTAAATT CATATAGATG GAAAAGTAAA AAATGGCAAG GCAAAGCACT GGTATAA
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| Protein sequence | MASKQLSLKH LSMPILLEMF LRYFSLIINT VMVSQYSNFL VGAMGAGNQV ADLFIIIFSF
LSVGCSVVIA QALGAKDYTL ARKAIHQSLF LNALLGFVCG SLILWHGEFL LYLLQIPNEL
LKDSAIYLHM LGICLFFDAM GIVLAAIIRV YNMAYWVMFT TLLMNIVIFI GNFYVLHFTK
LELFGVGLSN ILGRLVAFSM LIAILSFKLK IHLKIKEMIN LEKSVFKKIF NIGGFAAGEH
LIWFIQYTIA FAFVASLGKE NLSVQTIYFQ ISLLIMLVGQ AISVANEIII GKLVGAKYLN
VAYKHTWIAL YFSVVASAFV ALLNYVLQDF TMGVVKLEES LKELMIPLFT LSIFLEISRT
FNIVMVNSLR ASGDARFPFL SGVVFMLGVS LPVGYVLCFY AGLGILGVWI GFCADEFLRG
IVNSYRWKSK KWQGKALV
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