| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0789 |
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| Symbol | hypD |
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| ID | 7410123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 748468 |
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| End bp | 749559 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643717919 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002575367 |
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| Protein GI | 222823793 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.633306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA TTAATGATTT TAGAGATAAA GAAAGAATTT TAGCCCTAAA AGAACTTATT
GCTTCTAAAA TTACTAAGTC TATTAATATC ATGGAAATTT GTGGTGGACA TACGCATAGT
ATTATGAAAT TTGGCTTGCC TGATTTATTA CCAAAAGAAA TTAATTTTGT TCATGGCCCA
GGCTGTCCTG TGTGTGTTAT GCCAAGAGAG CGTATTGATG TAGCTTTAAA ACTTGCAAGT
ATACCAAATA CTATCTTTTG TGTATTAGGC GATATGCTTA AAGTGCCAGG AAGCTATGAA
AGCTTAATTG ATCTTAGAGC TAAAGGTGCT GATATTAGAG CGCTTTATAC ACCTTTGGAT
GTGATAGATA TAGCTTTAAA AAATCCTGAA AAAAATATAA TCTTTTTTGC CATAGGTTTT
GAGACTACAA CCCCTATGAG CGGGGTGATT ATAGAAAAAA GTATAGCCTT AAATTTAAAA
AATTTATTTT TTCATATCAA TCATGTATTA GTTCCACCTG CGGTAGAAGC TATCATGCAA
GATGAAAATG TAAAAATTGA TGCCTTTTTA GGGCCTTCTC ATGTTAGTGT CATCACAGGA
TCAAACATTT ATGAACCTAT TGCTAAAAAA TATAAAACCC CTATAGCAGT GAGTGGTTTT
GAACCGGTTG ATATAATGCT TAGCGTGTTA AATATAGTAG AGCAAATGAA TGCAAATACT
TTTGAAGTTT ATAATGAATA TCACAGAGTA GTTAGTAAAG AAGGAAATTT AAAAGCCAAA
GCTTTAGTGG AAAAATACTT TAAACCTTGT GATTTTGAAT TTAGAGGTCT TGGAGTGATT
GTAAATGGCG GGCTTTGTTT AAAAGATGAA TTTGCTCACT TAGATGCTAG CAAGGTGTTT
GATTGTAAAG TACAAAGTAA AGATGAAAGT AAGGCTTGCA TTTGTGGTCA AATTTTAAGA
GGCTTAGCTA AGCCTTATGA TTGTAAGGTG TTTGCAAAAG CTTGCACTCC AAAAAATCCC
ATAGGTAGCT GTATGGTTTC TAGTGAAGGA GCTTGTGCGG CTTATTATAA ATACTATCAA
GATAAGGCAT AA
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| Protein sequence | MDLINDFRDK ERILALKELI ASKITKSINI MEICGGHTHS IMKFGLPDLL PKEINFVHGP
GCPVCVMPRE RIDVALKLAS IPNTIFCVLG DMLKVPGSYE SLIDLRAKGA DIRALYTPLD
VIDIALKNPE KNIIFFAIGF ETTTPMSGVI IEKSIALNLK NLFFHINHVL VPPAVEAIMQ
DENVKIDAFL GPSHVSVITG SNIYEPIAKK YKTPIAVSGF EPVDIMLSVL NIVEQMNANT
FEVYNEYHRV VSKEGNLKAK ALVEKYFKPC DFEFRGLGVI VNGGLCLKDE FAHLDASKVF
DCKVQSKDES KACICGQILR GLAKPYDCKV FAKACTPKNP IGSCMVSSEG ACAAYYKYYQ
DKA
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