Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0774 |
Symbol | |
ID | 7410108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 735770 |
End bp | 736396 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643717904 |
Product | conserved hypothetical protein, putative HAD superfamily hydrolase |
Protein accession | YP_002575352 |
Protein GI | 222823778 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAAATG TAATTTTTGA TATGGATGGC ACGCTTATAG ATAGTGCTAA TGCTATAGTA TGTGCGGTAA ATGAAATAAG AGCGGATTTA AATTTAGAAC CTTTAAAAAG AGAGTTTATT TTAGATACTA TCAATACTCC TGGGCAAAAT TATGCTAAGA TTTTTTATGG GGTTGATACT TACTCACATA CTAGCTTTAA AGAAGGCTAT GAAAAGTATT TCATAAAACA TTACGATCAA AGCGTGGTAC TTTTTGATGG TGTGTTTGAG GTTTTGGAAT TTTGTAAAAA AAATGATTGC TATTTAGCTA TAGCTACTAA TGCGCCTCAA GAAAGCTTGG TGCCTATTTT AAAAAAACAA AACATTCTTT CATATTTTGA TAAAATATTA GGTGTTAGTT ATGGTATAGA AGCTAAACCT GATCCTATGA TGTTAAGATT AATCGCAGAT GAAGCAAAAT ATGAAAAAAG TATTTTCATA GGCGATAGTT TAAAAGATAG ACTTTGTGCT AAAAATGCCA AGATGGATTA TATACATATT TCTTGGCAAA AAGAAATTAA AAACTTAGAT GAAGCTAACG ATAAAACTAC TTTAATAGAT AAAATTCAAA CTCACATGAA AGGTTAA
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Protein sequence | MINVIFDMDG TLIDSANAIV CAVNEIRADL NLEPLKREFI LDTINTPGQN YAKIFYGVDT YSHTSFKEGY EKYFIKHYDQ SVVLFDGVFE VLEFCKKNDC YLAIATNAPQ ESLVPILKKQ NILSYFDKIL GVSYGIEAKP DPMMLRLIAD EAKYEKSIFI GDSLKDRLCA KNAKMDYIHI SWQKEIKNLD EANDKTTLID KIQTHMKG
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