Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0696 |
Symbol | aroB |
ID | 7410030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 666723 |
End bp | 667781 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717827 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_002575276 |
Protein GI | 222823702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.701677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTA AAGTAAATTT AGAAAATAAT ACAAGTTATA ATGTCTATAT AAATGAATTA GAAAAGTTAA ATTTTGATAC TAAAGTAGTG ATTTTAACTA ATGAATTAGT AGCAAAGCTA CATTTAGATA CGCTTTTGGA AAAAATTCAA GCTAAAGAAC TTTTTATCAT AAAAATCAAA GATGGTGAAG AGTATAAAAA TTTACAAACT ATAGAATATA TCTTAAATCA AATGTGCGCT TATAAGCTAG ATAGAAAAAG CTTGCTTATT AGCTTTGGTG GCGGGGTGAT CTCTGATATG GGTGGTTTTG TAGCAAGTAT ATATCAAAGA GGGATAGAAT TTATCAATAT CCCCACAACT TTACTAGCTT GTGTGGATGC AAGTGTGGGT GGTAAAACTG GAGTTAATAA TAAATTTGGC AAAAACTTAA TAGGTACTTT TTATCAACCA AAAGCAGTGT ATTGTGAGAG TAGATTTTTA AAAACTTTAC CTTCAAGAGA ACTAGCTGCG GGTATGGCTG AATTTATCAA AATGGCTGTG GTTTTTGATG AAACGATTTT ATCTTTTTTA GAAAATTTAA ACGAGGATAA ATTTTTAAAT GCCAAATTAG ATGATATTAC TTTGGCTCAA ATCATCCAAA AAAGCATAGA ACTTAAAGCT AGTGTGGTTT CACAAGATGA AAAAGAAAGC GGTTTGAGAA TGCTTTTAAA TTATGGACAC ACCTTTGCTC ATGTTATAGA AAATCAAACA GGCTATAAAA AATACTTACA TGGCGAAGCT GTGGCTATAG GTATGAATAT GGCAAATGTT TTAGCACTAA ATTTAGGATT GTTAAGTGAG CAAGAATGCC AAAGAGTACA AAATTTACTT GCGAAATTTA AATTACCTAT ATCTTATAAA ATTTCAAATA CACATGAGTT TTACAATGCC TTTTTCTTGG ATAAAAAGAC ACATTTTCAA AAGATTAATT TCATTTTAGC TTGTGGCTTG GGAAAAGCTT GTATAAAAAA TGATATAAGC AAAGAAGATA TTTTGCGCAC TTTAGAGGTG TTTGCATGA
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Protein sequence | MQVKVNLENN TSYNVYINEL EKLNFDTKVV ILTNELVAKL HLDTLLEKIQ AKELFIIKIK DGEEYKNLQT IEYILNQMCA YKLDRKSLLI SFGGGVISDM GGFVASIYQR GIEFINIPTT LLACVDASVG GKTGVNNKFG KNLIGTFYQP KAVYCESRFL KTLPSRELAA GMAEFIKMAV VFDETILSFL ENLNEDKFLN AKLDDITLAQ IIQKSIELKA SVVSQDEKES GLRMLLNYGH TFAHVIENQT GYKKYLHGEA VAIGMNMANV LALNLGLLSE QECQRVQNLL AKFKLPISYK ISNTHEFYNA FFLDKKTHFQ KINFILACGL GKACIKNDIS KEDILRTLEV FA
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