| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0609 |
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| Symbol | rluD' |
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| ID | 7410675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 579206 |
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| End bp | 580168 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643717740 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_002575189 |
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| Protein GI | 222823615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAAAAA TTTCATCACT TTGTGAAGAA AGATTGGATA TTTTTTTATC AGATATACTT
AAGCAAAGTC GTTCGCAAGT TGCTAAACTA ATCAAAGAAA ACTGCATATA TATTAATGAA
AAAATAGAAA ACAAAAGCTC TAAAAAAATT AAACAAAAAG ATGAAATAAG TATTTTTTTA
CCTTTAATAA AAGAAGCCAA AGAAAGCTAC ACACCTGAGT TTGATATAGA AATTTTATAT
GAAGATGATG ATGTTTTAGT TTTAAACAAA GCTCCTAATA TTGTTGTGCA TGGTGCAAGT
AGTGTTAAAG AAGCGACTTT GGTGGATTGG CTTTTGCATA AGGGCTATAC TTTATCAAAT
TTAAATGGAG AGCATAGAGC AGGGCTTGTG CATAGACTTG ATAAAGGCAC AAGCGGAGCT
ATCATCATAG CTAAAAACAA TCAAGCACAT CAATTTTTAG CAAATCAGCT TTTAGATAAA
AGTATGGGAA GATTTTATCT TGCTTTGAGT GAATTGCCTT TGAAAAATGA TAAAATGAGT
AATGAAAAAG CCATTATGCG TTGTCCTAAT AATAGGCTTA AAAAAATTAC TACAAATACC
AAAAATCCTT TAGCAAAAAA TGCAAAAACA GATTTTATAA ATTTATTAAG TGCTAAAAAC
TGCTCTTTAA TAGCTGCTAA ATTATATACA GGAAGAACCC ATCAAATCAG GACGCATTTG
GCAGATTTTA ATCGCTATAT TTTAGGAGAT GAATTATACG GATATAAAGG AAAAATAAAG
TATAATAGAG TAATGCTTCA TGCGTATTTG ATTTATTTTA TTCATCCTAG GACTAAAGAA
TTAATGTTTA TAAAAGCTCC TATGTTTGAT GATTTTTATC AAATTTTAAA AGAAAATTTT
ACACAAGGAG AGATAGATGA AAAAACTTCA CTGGATTATC TTAAGTTCTG CTTTGGCTTT
TAG
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| Protein sequence | MLKISSLCEE RLDIFLSDIL KQSRSQVAKL IKENCIYINE KIENKSSKKI KQKDEISIFL
PLIKEAKESY TPEFDIEILY EDDDVLVLNK APNIVVHGAS SVKEATLVDW LLHKGYTLSN
LNGEHRAGLV HRLDKGTSGA IIIAKNNQAH QFLANQLLDK SMGRFYLALS ELPLKNDKMS
NEKAIMRCPN NRLKKITTNT KNPLAKNAKT DFINLLSAKN CSLIAAKLYT GRTHQIRTHL
ADFNRYILGD ELYGYKGKIK YNRVMLHAYL IYFIHPRTKE LMFIKAPMFD DFYQILKENF
TQGEIDEKTS LDYLKFCFGF
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