| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0506 |
|---|
| Symbol | |
|---|
| ID | 7411066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 482323 |
|---|
| End bp | 484356 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 643717637 |
|---|
| Product | conserved hypothetical protein, putative organic solvent tolerance protein |
|---|
| Protein accession | YP_002575105 |
|---|
| Protein GI | 222823531 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTAAAA TATTGCTTTC TTTGGCTTGC GTAGGGAGTT TATATGCTTC TAAGGTAGAT
ATTTATGCTT TAGATGTTGT AAAAACAAAT GATATTATAG AAGCAAAAAA TAATGTGGTT
GTAGTTTCTG ATTTGTATTT AATAACCGCA AACGAGGCTA AATTTAATGA AACAACTAAA
GATTTAGAAT TGTTTGGTGA TGTAAATATC TTACGAGGGC AAAAAGAAAG AACTAATTCT
ACTTATACTA AAATTAATCT TAAAGATAAT ACAACAGCTT TTAAAAATTT ATTTTTTTCA
AATAATGATT TAGAGGTTTG GCTGCAATGT CATCAAGCAA ATTTAAATGA TAAGTTTGTT
GTAACTAAAA AGTCGGTTGT TTCTAGTTGT AATGTTGAAA ATCCTGATTG GGAAATTCGT
TTTGATGAGG GTAAATTAAA TAAAGAGAGT AATTTTTTAC ATCTTTATAA TGCAAAATTA
TATGTAAAAA ATACCCCTGT GATGTATTTG CCGTATTTTG GCTTTAGCGT AGATACCAAA
AGAAAAAGTG GTTTGTTAAT TCCTCAGGTG ATTTTAAAAC AAAGCGAGGG ATTATATTAT
AACCAACCAA TCTATTATGT TATTGATGAT AGTGTAGATA TTCAATTTGA ACCTCAAATT
AGGACAAAAA GAGGCTATGG ATTATACTCA ACTTTAAGAT TTATTGATAG TCCTTATTCT
CAAGGTGAAA TTAGCGGTGG TATTTTTGGA GAAAAATCAA GCTATAAAAA AGAAGAAAAT
TTAAAAAACA AAGAACATTA TGGTTTAGAG ATTAAATATT CAAGCGAAGC TTTATTCAAG
AGTCTTTTGA GTGATGAATT TCAAGAAGGC TTATGGATTG ATGCTACTTA TTTAAATGAT
GTAGATTATA TGAACTTAAG CTCTAGTGCA AAAACTGAAG CTTCTTTGGT TACCTCAAAA
ATAAATTATT TCTTATCTGA TGATGATAAT TATTATGGTG CTTATGCGAA GTATTATATA
GATACTTCTA AAATTAGCAA CAAAGATACC ATGCAAGAAT ACCCTTCTTT TCAGTATCAT
AGATATTTAA ATGGTTTTTT TGATAACTAT ATACAGTATA GCTTAGATGC TTCTTTTCAT
AGATATTATA GACATACGGG TATTTATGCT AAAACTTTAG ATTTTGATTT ACCTTTAATT
TATCATACAA GTTTTTTGGA TGATTTTTTA AATTTTGCCT TTACAGAAAG AGTTTATGCA
AATTTTGTAG ATTATTCTAA TACAGATAGT AAAAATCAAG AGCACTTGTT TAGAAATTCA
CATAATTTTT CTTTATATAC AGATCTTTCT AAACCTTATG AAAATTTTTA TCATACCTTA
TATTTAGGTG CTAATTATTT TATACCCGGG GCTAAATCAG GTAAAATTAC AGAAGATTTT
ATAGAATTAA AAGATGATCC TGAACAGTTT AATTTTTCGA TGTATCAGTA TTTTTATAGT
GCTTTAGGTA AAAAAAAGCT ATATCATAGT TTAAAGGCTA AATATTTTAC CAAAGAAGGT
AGTTTTGGTG GTTTTGACAA TGTTGTGGAA TATTTTTATA ATGATTATAT AAGTTTAAGA
AATGAGGCAG AATATTCAGG GGTAGATAAT CGCTTTGATA AAGTATTTAG TGAAGCCTTG
TTTGATTATG GTGAGTGGAA AGTTAGTTTA AATCATGCTT ATAGAATATA TGAAAAAGAA
AAATATAATT TTTTAGGAAC TAAAGCTCAG TATGATATAA ATACTAACTA TCAAATATTT
GGTGGTTTGT GGTTTGATTT AAATAAAGAT CCTGAAAAAT GGGAGGTAGG TTATACTTAT
CAAAGAAAGT GTTGGAATTA TTCTTTGATG TACCGTAAGG ATATTTCACC TAAACTTACT
AGCGGTGGGA TTAGCGCTAA AGATCAAAGC GGTGTATATT TTATGTTTAA TTTTTATCCT
TTGGGTGGTG TATCTTATGA TTTTTCTTTG GAAGAAAATG AAAGGTCTAT ATAA
|
|---|
| Protein sequence | MRKILLSLAC VGSLYASKVD IYALDVVKTN DIIEAKNNVV VVSDLYLITA NEAKFNETTK
DLELFGDVNI LRGQKERTNS TYTKINLKDN TTAFKNLFFS NNDLEVWLQC HQANLNDKFV
VTKKSVVSSC NVENPDWEIR FDEGKLNKES NFLHLYNAKL YVKNTPVMYL PYFGFSVDTK
RKSGLLIPQV ILKQSEGLYY NQPIYYVIDD SVDIQFEPQI RTKRGYGLYS TLRFIDSPYS
QGEISGGIFG EKSSYKKEEN LKNKEHYGLE IKYSSEALFK SLLSDEFQEG LWIDATYLND
VDYMNLSSSA KTEASLVTSK INYFLSDDDN YYGAYAKYYI DTSKISNKDT MQEYPSFQYH
RYLNGFFDNY IQYSLDASFH RYYRHTGIYA KTLDFDLPLI YHTSFLDDFL NFAFTERVYA
NFVDYSNTDS KNQEHLFRNS HNFSLYTDLS KPYENFYHTL YLGANYFIPG AKSGKITEDF
IELKDDPEQF NFSMYQYFYS ALGKKKLYHS LKAKYFTKEG SFGGFDNVVE YFYNDYISLR
NEAEYSGVDN RFDKVFSEAL FDYGEWKVSL NHAYRIYEKE KYNFLGTKAQ YDINTNYQIF
GGLWFDLNKD PEKWEVGYTY QRKCWNYSLM YRKDISPKLT SGGISAKDQS GVYFMFNFYP
LGGVSYDFSL EENERSI
|
|---|
| |