Gene Cla_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0492 
SymbolaroE 
ID7411052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp467483 
End bp468268 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content29% 
IMG OID643717623 
Productshikimate 5-dehydrogenase 
Protein accessionYP_002575091 
Protein GI222823517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT TTGCAGTTAT AGGTGATCCT ATTATGCATT CTAAATCTCC AAGAATGCAT 
AATAATGCCT TGCAAGCTCT CAAAGAAGAA GCAGTTTATA CAAGATATCA TCTAAAAGAT
AAAACAAAAT TAAAAGAAAT TGTTCAAAAG TTAGATGGTG TTAATATCAC CATACCTTTT
AAAGAAGTAG CTTGCGAAAT AGCTGATTTT AAAGACGAAA GTGTTATGCG TATAGGCTCT
GCTAATACTT TATTAAATAA AGATAATAAA ATTTATGCTT ATAATACAGA TTATTTGGGA
TTTTTAAAAG CAATTGAAGA TTTTTCTTTT GTTAAAAGTG CTTTAGTTTT AGGTGCTGGA
GGTACAGCTA AAGCTTTAGC ATATGCTTTA AAATCTATAA ATATTGAAGT TACGGTAGCA
AATCGTTCTA GCGTTAGATT TGAAAATTTA ACCAGCTATC CATGTTTTTT ATATAATCAA
CTTGATTTAA GTAAAAAATT TGATTTGATA ATTAATACAA CTAGCGCAGG TTTAAATGAT
GAGAAACTAC CTTGTCAAGA AGAGATTTTA AAAAGTATTT TTCAACATGC CAAATATGCT
TTTGATGTGA TTTATGGTAA AAATACACCT TTCTTAAAAT TAGCAAGAGA AAATGGCTTA
AAAATAAAAG ATGGCGCACA AATGCTTTTA TGGCAAGGTG TTTTTGCTCT TGAGCTATTT
TTAGAATGTC AAAAAAAAGA AGAAATTTTT AAAGCCATGG AGATGGCTTT AAAACTCCCT
CAGTGA
 
Protein sequence
MKTFAVIGDP IMHSKSPRMH NNALQALKEE AVYTRYHLKD KTKLKEIVQK LDGVNITIPF 
KEVACEIADF KDESVMRIGS ANTLLNKDNK IYAYNTDYLG FLKAIEDFSF VKSALVLGAG
GTAKALAYAL KSINIEVTVA NRSSVRFENL TSYPCFLYNQ LDLSKKFDLI INTTSAGLND
EKLPCQEEIL KSIFQHAKYA FDVIYGKNTP FLKLARENGL KIKDGAQMLL WQGVFALELF
LECQKKEEIF KAMEMALKLP Q