Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0492 |
Symbol | aroE |
ID | 7411052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 467483 |
End bp | 468268 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643717623 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002575091 |
Protein GI | 222823517 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT TTGCAGTTAT AGGTGATCCT ATTATGCATT CTAAATCTCC AAGAATGCAT AATAATGCCT TGCAAGCTCT CAAAGAAGAA GCAGTTTATA CAAGATATCA TCTAAAAGAT AAAACAAAAT TAAAAGAAAT TGTTCAAAAG TTAGATGGTG TTAATATCAC CATACCTTTT AAAGAAGTAG CTTGCGAAAT AGCTGATTTT AAAGACGAAA GTGTTATGCG TATAGGCTCT GCTAATACTT TATTAAATAA AGATAATAAA ATTTATGCTT ATAATACAGA TTATTTGGGA TTTTTAAAAG CAATTGAAGA TTTTTCTTTT GTTAAAAGTG CTTTAGTTTT AGGTGCTGGA GGTACAGCTA AAGCTTTAGC ATATGCTTTA AAATCTATAA ATATTGAAGT TACGGTAGCA AATCGTTCTA GCGTTAGATT TGAAAATTTA ACCAGCTATC CATGTTTTTT ATATAATCAA CTTGATTTAA GTAAAAAATT TGATTTGATA ATTAATACAA CTAGCGCAGG TTTAAATGAT GAGAAACTAC CTTGTCAAGA AGAGATTTTA AAAAGTATTT TTCAACATGC CAAATATGCT TTTGATGTGA TTTATGGTAA AAATACACCT TTCTTAAAAT TAGCAAGAGA AAATGGCTTA AAAATAAAAG ATGGCGCACA AATGCTTTTA TGGCAAGGTG TTTTTGCTCT TGAGCTATTT TTAGAATGTC AAAAAAAAGA AGAAATTTTT AAAGCCATGG AGATGGCTTT AAAACTCCCT CAGTGA
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Protein sequence | MKTFAVIGDP IMHSKSPRMH NNALQALKEE AVYTRYHLKD KTKLKEIVQK LDGVNITIPF KEVACEIADF KDESVMRIGS ANTLLNKDNK IYAYNTDYLG FLKAIEDFSF VKSALVLGAG GTAKALAYAL KSINIEVTVA NRSSVRFENL TSYPCFLYNQ LDLSKKFDLI INTTSAGLND EKLPCQEEIL KSIFQHAKYA FDVIYGKNTP FLKLARENGL KIKDGAQMLL WQGVFALELF LECQKKEEIF KAMEMALKLP Q
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