Gene Cla_0318 details

Gene Information

• Locus tag: Cla_0318
• Symbol: kpsC
• ID: 7410226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 290211
• End bp: 292238
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 643717450
• Product: capsular polysaccharide export protein KpsC
• Protein accession: YP_002574929
• Protein GI: 222823355
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3563] Capsule polysaccharide export protein

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTT ACACTATATC AAAAAAACTA AAAGAAAATG TCAAAAATTT TTACAAAATA 
ACTCTGTATC ATGCCCATAA AAACATCACA AAAGAAGATG TTTTTATAGG TTGGGGTAGA 
AAAAAGTCAG GTTTAAAAGC TGTAGAACTA GCTAAAAAAT ATAATGCAAG ATTTTTGCTT 
TTAGAAGATG GCTTTTTACG CTCACTAAAT TTAGGTATGG AAAATAGTCC AAGTTTTTCT 
AATGTCAAAG ATGATGTGGG AATTTATTAT GATGCCACGA CTCCATCTAA ACTTGAAAAT 
ATTTTAAATA CTTATGAATT TGACTCTAAA GAGTTAGAGC AAGCAAAAAA GGCCATAGAG 
CTTATAAAAA AAGAAAAGCT TAGCAAGTAT AATAATAATC TTTGCGTGCC AAAAGAGCTT 
TTTAATATTA ACGAAGAACG TGTACTAATC ATCACTCAAG TAGCAAATGA TGCTTCTCTT 
AAATTTGGCT TGGCTGAGAA TTTTTTAACT CACGATATTA TAAATGAAGC TATTAAAGAA 
AATCCAAATG CTAAAATATA TATTAAAATT CATCCTGATG TATTAAGTGG TAAAAAACAA 
AGTGATTTTG ATGTGCAAGA TTTGTCAAGT AAATGTGTAG TTATAAAAGA AAATTATAAT 
CCTATAGAAT TACTAAGTTG TTTTAAAAAA GTTTATACCA AAACTTCTGG CATGGGTTTT 
GAAGCTTTGA TATTAGGATG TGAATGTGTA TGTTATGGCG TGCCATTTTA TGCAGGTTGG 
GGTTTAACGC AAGATAAACA AGTATGTAAA AGAAGGCTTA AAAAAAGAAC TTTGGAAGAG 
GTTTTTTATG CTACTTACTT TTTATATAGC GAGTATTTTA ATCCTTACTT AAATCAAAAA 
AGTGATATTT TTGATACTAT TCATACTTTA GCAAAGTATA AAAAGATAGA ACAAGCTAAT 
TCTAATACTT TGTGTTTTTT AGGTTTTTCT AAATGGAAAA GAGAGTTTGT AAGACCTTTT 
TTTGAAGCTA AAAATAATAA AATCATTTTT TTAAACTCAT TAGATGAACT TTACAAAGCG 
AATTTAAATC CTAAAGATAA AATTTTCATT TGGGGTAAAA AGTATGATAA AACTTTACTA 
GCTAAAGATT TTAGCAATGA AATTTTCTTA GTAGAAGATG GTTTTTTGCG CTCTGTTTTT 
TTAGGTTCAG ATCTTACACG CCCTTTTTCT TTGATAATAG ATAGTAAAGG TTTGTATGTT 
GATCCAAGCA AGCCAAGCGA TTTGGAAGAT ATTTTGCAAA ATCACATTTT TGATGAGAGT 
TTAAAACAAA GAGCCAAAAA ATTAATCACT ATAATCATGC AAAATAAATT TTCAAAGTAT 
AATGGCTTAA AGCATGAAAA ATTAAATTTT AATACCAACA AAAAAATTAT TTTAATCCCT 
GCTCAAGTGG AAGATGATGC TTCTATGATC TTAGGTAGTG CAGGTTATGA TACTTTAAAA 
CTTTTACAAA GTGTAAGAAA GGTCAATGAA AATGCCTTTA TAGTGTTTAA ACCACATCCT 
GATGTTTTAA GTGGTAACCG TAAAGGCTTA AAAGATAAAA GCATTATTTT AAAATACTGT 
GATGAAATTA TAGAAAATGT CAGTATAGAT AGTGCTATCA ATGCATGCAA TGAAGTACAT 
ACTATAACCT CCACAAGCGG TTTTGATGCT CTTTTGCGTG GCAAAAAAGT AGTGGTCTAT 
GGCAAGCCTT TTTACGCAGG TTGGGGTTTG ACAAGCGATT TACATAAAAT TCCAAGACGC 
ACAAGAATAC TTAGTTTAGA AGAGCTTGTT GCTGGCGTTT TGATCCTTTA TCCAAGATAC 
ATCCATCCAA AAAGTAAAAA TTTATGTGAA GTTGAGCTTG CTTTAGATAT AATGTTAAAA 
ATGCAAAAAG ATTATTTTTC TAAATTTTAT TTGCGTTGGT TTATGGATAT AAGAATTTAT 
ATATTAAGAA AAATAAGAAG ATTGATAGAA TTTATTTTGA TTAGATGA 

 

Protein sequence

MKFYTISKKL KENVKNFYKI TLYHAHKNIT KEDVFIGWGR KKSGLKAVEL AKKYNARFLL 
LEDGFLRSLN LGMENSPSFS NVKDDVGIYY DATTPSKLEN ILNTYEFDSK ELEQAKKAIE 
LIKKEKLSKY NNNLCVPKEL FNINEERVLI ITQVANDASL KFGLAENFLT HDIINEAIKE 
NPNAKIYIKI HPDVLSGKKQ SDFDVQDLSS KCVVIKENYN PIELLSCFKK VYTKTSGMGF 
EALILGCECV CYGVPFYAGW GLTQDKQVCK RRLKKRTLEE VFYATYFLYS EYFNPYLNQK 
SDIFDTIHTL AKYKKIEQAN SNTLCFLGFS KWKREFVRPF FEAKNNKIIF LNSLDELYKA 
NLNPKDKIFI WGKKYDKTLL AKDFSNEIFL VEDGFLRSVF LGSDLTRPFS LIIDSKGLYV 
DPSKPSDLED ILQNHIFDES LKQRAKKLIT IIMQNKFSKY NGLKHEKLNF NTNKKIILIP 
AQVEDDASMI LGSAGYDTLK LLQSVRKVNE NAFIVFKPHP DVLSGNRKGL KDKSIILKYC 
DEIIENVSID SAINACNEVH TITSTSGFDA LLRGKKVVVY GKPFYAGWGL TSDLHKIPRR 
TRILSLEELV AGVLILYPRY IHPKSKNLCE VELALDIMLK MQKDYFSKFY LRWFMDIRIY 
ILRKIRRLIE FILIR