| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0293 |
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| Symbol | kpsD |
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| ID | 7410201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 261469 |
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| End bp | 263127 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643717427 |
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| Product | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein |
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| Protein accession | YP_002574906 |
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| Protein GI | 222823332 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.994472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TATTTTTATT TTTACTTTTA CCTTTATTTT TATTTTCAGC GGTAGATGTT
TCTCAAATCG CAAAAATTCA AAATCAACAA TCAACCCCAT CTTTAGAGCC ACAAGTTGTA
AACTATGATA ACAACCAAAG TGATTTTAAT CAAACTCAAG CATCGATAGC TAAAGTATTT
GGTGCACATT TATTTAATGG AAACTTTACT AAATTTACCC AACATGTTTA TAATCCTGAC
TATAAACTAG CAGTAGGTGA TAGGATTAAT GTAAAAATTT GGGGTGCAGT AGAGTTTATA
CAAACTTTAA CAGTGGATTC TCAAGGAAAT ATTTTCATAC CAAAAGTAGG AGCTATTAAT
CTTTTGGGTG TAAAAAATAG TGCTTTAGTG CAAGTTATTA CAAAAGCTAT TAATAAAATT
TATAAAAGCA ATGTCTATGT ATATGCGGAT ATGGATATTT ATCAAAATGT ATCGGTATTT
GTTACAGGAA ATGTAAATCA ACCAGGTCTT TATCAAGGAT TGAGTTCAGA TTCTATCATA
CAGTATTTAG ATAAAGCTAG TGGGATTAAT TTAGAATATG GTAGCTTTAG AGATATTCAA
ATTTTAAGAG ATAATAAAGT CATTAAAAAA GTAGACTTGT ATGATTTCTT ACTTAAAGGT
CAGCTTGATC TTTTTCCTTT TAGAATGGGT GATGTGATTT TAGTGGGTAG TGTGCAAAAG
TATGTTTTTG TTGAAGGAGA TGTACAAAAA CCTTTTAGAT TTGAGTTAAG TAACGATATT
TTAAATTTAG AAGATATAGC CAAAGTTGCA GGAGCTAAGC CTATAGTAAC TAATGCTGTG
GTAAAAAGTT ATAGAGATGA TCATAAATTA CATGTGGATG CTTACAGCAA AAAGCAGTTT
TTAGGCGTGA AATTATACAA TGGCGATGAG ATAGAGTTTA GACCTGATTA TACTGCGCAA
AATATTAGCA TTAGCATAGA AGGTGAGCAT AGTGGTTTGC ACTCGGTGGT GATAAAAAAA
GGCACAACTT TAGCTGAACT TGCTAAAATG ATTACAGTTA ATGATCAATC AAACATCAAT
GCCTTGCAGG TTTTTAGAAA AAGTGTAGCA GCTACTCAAA AACAACTTAT AGAAGCTCAG
CTTAAAGAGC TTGAAACACT AGCTCTAACA AGCTCTTCAG TCAATGCTGA GCAAGCTAGC
ATTAGAGCTA CTCAAGCTAA GACGATTTTA GAATTTATTG CGCGTGCAAA ACAAGCTCAA
CCAAAAGGAC AAATCGTTAT AGACAATGTC AAAGCGTATA ATTCTATAGT ATTAGAAGAA
GATGATGTGG TGAATGTGCC TAGTAAAAAT AATCTTGTTT TGGTTCAAGG TGAAGTTTCT
ATACCAGGTG CATTTGTATA CATGGATAAA GAAAAATTAA GATATTATAT TAACTTAGCG
GGTGGCTTTA GCGATAGAGC TGATATATCA AGAGTTTTAG TGATTAATGC TAATGGTAAA
GCAACTAAAT ACAGCGGTAG AAGCTCAGCA GATATCAAAG CAGGAGATTC GATTTTAGTT
TTACCGAAAG TAGACAGTCA AAATTTACAA ATTTTTAGCA TGTTAACACA AATTTTATAT
CAAATTGCGA TTGCAACTAA TGTAGTGTTA AATATATAG
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| Protein sequence | MKKIFLFLLL PLFLFSAVDV SQIAKIQNQQ STPSLEPQVV NYDNNQSDFN QTQASIAKVF
GAHLFNGNFT KFTQHVYNPD YKLAVGDRIN VKIWGAVEFI QTLTVDSQGN IFIPKVGAIN
LLGVKNSALV QVITKAINKI YKSNVYVYAD MDIYQNVSVF VTGNVNQPGL YQGLSSDSII
QYLDKASGIN LEYGSFRDIQ ILRDNKVIKK VDLYDFLLKG QLDLFPFRMG DVILVGSVQK
YVFVEGDVQK PFRFELSNDI LNLEDIAKVA GAKPIVTNAV VKSYRDDHKL HVDAYSKKQF
LGVKLYNGDE IEFRPDYTAQ NISISIEGEH SGLHSVVIKK GTTLAELAKM ITVNDQSNIN
ALQVFRKSVA ATQKQLIEAQ LKELETLALT SSSVNAEQAS IRATQAKTIL EFIARAKQAQ
PKGQIVIDNV KAYNSIVLEE DDVVNVPSKN NLVLVQGEVS IPGAFVYMDK EKLRYYINLA
GGFSDRADIS RVLVINANGK ATKYSGRSSA DIKAGDSILV LPKVDSQNLQ IFSMLTQILY
QIAIATNVVL NI
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