Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0114 |
Symbol | |
ID | 7411346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 98045 |
End bp | 99124 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643717250 |
Product | hypothetical protein |
Protein accession | YP_002574731 |
Protein GI | 222823158 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.000396595 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTTT TACTTTGTAT TTTGGGCATA ACTTGTGTAC TTTTTGCTGT GCCAAGACCG ACTTTTAATG ATTTTTTGGG TTGTTATGAA AAAAATAAAG CCAGTATGTT AATTTATGAG GGTTTACCTG CTTTTGCTTT AAATGAAAAC ACCCTAGCAG TAGTTAAAAC TAAAAATGCA AAATTAAACA GCTATACTAA ATATGATCCA TTCTTAAATT TGTATTTAGT AAAAACTGAT TTTAGTTTAA TTCCTGCTCC TATGGGCGAT GAAGAAGAAT TAACACGCAA TAGCTGGGTG GGAATTTTAG ATAATAATCA AAGCTATATA GGACATTTAA AGTATTTTGG ACAAAGTTTA ACAGAGCGCG ATCAGCTTGA TTTTACTTCT AAAATCGGAG AGCTTAATTC TCCATGTTGT AAAATGCTTG GTATAAGCTT AGAAGATGGC AAACTTATAG GTAATCGCTA CTTAAAACAC TTTGCAAAAT ATCCTGATGT TTATTGGGGT GATATAGGTG TAGATTTTGA AATTCGTGAT GGCAAAATTT ATGTAAAAAA TGTACGCAAA AATGGACAAT TTTTACTTAA TGATGAGCTT GTGAGTGTAG ATGGGCAAGT TTATGATGAT ATAAGAAAGT TAAACGAGAA AATTTTATTT GCTGATCGTG GTGCAACTTT GTATTTTAAT ATGCTAAGAG ATAATAAAGA TGTAAATATT TCTACGACAG TTTTTGATAA AGATTTGGGC ATATTTGCTA AACCTAAAAA AGTAGTTCAA GCTAAGCCAA CTTCTTTTTA TAGTAATCTA GGATTACGCG TAGATATGAA AATGAATGTT ACAGAGGTAA CTCCAAATTC TAAAGCGCAA ATGGCTGGAT TTTTAAAAGG GGATAAGATT TTAAGAATTA ATAATCAAAA AATCAACAAT TTCAATGAAC TTCAAGCTAT ATTAGCTCAA GCTAATTCTT TTGATATTTT AGTTTCAAGA CAAGCAAGTA ATATGCCATC AGCACAAAAT AACGAACTTG AGCAAATAAA ACGAGGGTAT TTTGACTTTT TTATAAGGCT TACTAAGTGA
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Protein sequence | MRVLLCILGI TCVLFAVPRP TFNDFLGCYE KNKASMLIYE GLPAFALNEN TLAVVKTKNA KLNSYTKYDP FLNLYLVKTD FSLIPAPMGD EEELTRNSWV GILDNNQSYI GHLKYFGQSL TERDQLDFTS KIGELNSPCC KMLGISLEDG KLIGNRYLKH FAKYPDVYWG DIGVDFEIRD GKIYVKNVRK NGQFLLNDEL VSVDGQVYDD IRKLNEKILF ADRGATLYFN MLRDNKDVNI STTVFDKDLG IFAKPKKVVQ AKPTSFYSNL GLRVDMKMNV TEVTPNSKAQ MAGFLKGDKI LRINNQKINN FNELQAILAQ ANSFDILVSR QASNMPSAQN NELEQIKRGY FDFFIRLTK
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