Gene Cla_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0114 
Symbol 
ID7411346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp98045 
End bp99124 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content31% 
IMG OID643717250 
Producthypothetical protein 
Protein accessionYP_002574731 
Protein GI222823158 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000396595 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTT TACTTTGTAT TTTGGGCATA ACTTGTGTAC TTTTTGCTGT GCCAAGACCG 
ACTTTTAATG ATTTTTTGGG TTGTTATGAA AAAAATAAAG CCAGTATGTT AATTTATGAG
GGTTTACCTG CTTTTGCTTT AAATGAAAAC ACCCTAGCAG TAGTTAAAAC TAAAAATGCA
AAATTAAACA GCTATACTAA ATATGATCCA TTCTTAAATT TGTATTTAGT AAAAACTGAT
TTTAGTTTAA TTCCTGCTCC TATGGGCGAT GAAGAAGAAT TAACACGCAA TAGCTGGGTG
GGAATTTTAG ATAATAATCA AAGCTATATA GGACATTTAA AGTATTTTGG ACAAAGTTTA
ACAGAGCGCG ATCAGCTTGA TTTTACTTCT AAAATCGGAG AGCTTAATTC TCCATGTTGT
AAAATGCTTG GTATAAGCTT AGAAGATGGC AAACTTATAG GTAATCGCTA CTTAAAACAC
TTTGCAAAAT ATCCTGATGT TTATTGGGGT GATATAGGTG TAGATTTTGA AATTCGTGAT
GGCAAAATTT ATGTAAAAAA TGTACGCAAA AATGGACAAT TTTTACTTAA TGATGAGCTT
GTGAGTGTAG ATGGGCAAGT TTATGATGAT ATAAGAAAGT TAAACGAGAA AATTTTATTT
GCTGATCGTG GTGCAACTTT GTATTTTAAT ATGCTAAGAG ATAATAAAGA TGTAAATATT
TCTACGACAG TTTTTGATAA AGATTTGGGC ATATTTGCTA AACCTAAAAA AGTAGTTCAA
GCTAAGCCAA CTTCTTTTTA TAGTAATCTA GGATTACGCG TAGATATGAA AATGAATGTT
ACAGAGGTAA CTCCAAATTC TAAAGCGCAA ATGGCTGGAT TTTTAAAAGG GGATAAGATT
TTAAGAATTA ATAATCAAAA AATCAACAAT TTCAATGAAC TTCAAGCTAT ATTAGCTCAA
GCTAATTCTT TTGATATTTT AGTTTCAAGA CAAGCAAGTA ATATGCCATC AGCACAAAAT
AACGAACTTG AGCAAATAAA ACGAGGGTAT TTTGACTTTT TTATAAGGCT TACTAAGTGA
 
Protein sequence
MRVLLCILGI TCVLFAVPRP TFNDFLGCYE KNKASMLIYE GLPAFALNEN TLAVVKTKNA 
KLNSYTKYDP FLNLYLVKTD FSLIPAPMGD EEELTRNSWV GILDNNQSYI GHLKYFGQSL
TERDQLDFTS KIGELNSPCC KMLGISLEDG KLIGNRYLKH FAKYPDVYWG DIGVDFEIRD
GKIYVKNVRK NGQFLLNDEL VSVDGQVYDD IRKLNEKILF ADRGATLYFN MLRDNKDVNI
STTVFDKDLG IFAKPKKVVQ AKPTSFYSNL GLRVDMKMNV TEVTPNSKAQ MAGFLKGDKI
LRINNQKINN FNELQAILAQ ANSFDILVSR QASNMPSAQN NELEQIKRGY FDFFIRLTK