Gene Athe_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2241 
Symbol 
ID7407660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2376589 
End bp2377482 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content31% 
IMG OID643716607 
Productpolysaccharide deacetylase 
Protein accessionYP_002574086 
Protein GI222530204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA GATTTGTCTC AGCATTTTTT GCAGTAATAT TAATTTATAC ACTTATTTCT 
TCTGATTTAG TTTTCGCACA ACCTCAGCAA ATAAAGATAC CAGTACTTGT ATACCACTAT
TTTGCAAAGG ACCAAAAAGA AGCTCAAGAT TATAATTCTT CAACAGTTGT AGATATTCAA
AATTTTGAAG GACAAATGGA ATATTTGTAT AAAAATAATT TTAAAATACT GACAATGGAG
GAATTATACA AATTCTTGAA AGGCGAGTAT ACTCCCCCTA AAAAATCAGT TGTGATTACA
ATGGATGATG GTTACAAAAA CAATATTACC TTAGCATATC CTATCTTAAA AAAATATAGG
TTTAGAGCAT GTATATTTGT AATTGGAAAA TTTTTAATAT CTAAAAATTT CTCAAATGAA
TTTGAGTATC TTTCATTTGA AGACACTCTT AAATATACGG ACGTCTTTGA GTTTGGTTCC
CACACATATG ATATGCATAG GCTGCTAAAT GGAATGCCTA TTCTCCTTCA GGCTAACATG
CTGGACATCA TTTTTGATTT TGTAAACAAT CAAATGCTTA TAAATTCTCC TTATTTTGCT
TATCCGTTTG GCGCATATGA CGAAAGAGTA ATAGAAGTTT TAAGGTCTTT TAACTACAAA
TTAGCTTTTA CTACTAAAAA AGGATATGTA ACATCTTCTA CTGACCCGTA TGAGGTACCG
CGGTTTACTA TCTCACAGAA AACTACTTTT GACCAGTTTG TAAAAATTGT AAATGGTGAA
TATCCTGATA TCTATGTTCA CAATCCCAGT CACAAAACTT CCAAGGAAAA ACAGTCTGTT
AAAACATTGA CCGAAAAGAA GACAAAACAA AACTTATTGC AAAAAAGAGG CTAA
 
Protein sequence
MKVRFVSAFF AVILIYTLIS SDLVFAQPQQ IKIPVLVYHY FAKDQKEAQD YNSSTVVDIQ 
NFEGQMEYLY KNNFKILTME ELYKFLKGEY TPPKKSVVIT MDDGYKNNIT LAYPILKKYR
FRACIFVIGK FLISKNFSNE FEYLSFEDTL KYTDVFEFGS HTYDMHRLLN GMPILLQANM
LDIIFDFVNN QMLINSPYFA YPFGAYDERV IEVLRSFNYK LAFTTKKGYV TSSTDPYEVP
RFTISQKTTF DQFVKIVNGE YPDIYVHNPS HKTSKEKQSV KTLTEKKTKQ NLLQKRG