Gene Athe_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1880 
Symbol 
ID7408993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1988132 
End bp1988569 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content36% 
IMG OID643716252 
Producthypothetical protein 
Protein accessionYP_002573741 
Protein GI222529859 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.046895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCTT GGCTTGTAAA GCAGGTTAAC AGCAAGCACA AAGGTTTTAC ATTAATTGAG 
ATGGTTATAG TTGTTGCGAT AATTGCAATC TTGATTGCAA TTGCGGTACC TCAAGTATTA
AAACAGATAA ACAAGTCAAA AATTGAGGCT GATAAGGCAA ATGCAAAGAA TATTGCAACA
GCTATTCAGC AGTGGGTTTC AGAGGGAAAT GTGTTGAATG ATACAACTGA CTGGGTGAAA
ATAGAAAATA AAGTCCCTGT TAGCACTGGT AACGGTATAG TAGATTACTT GGGCAGTGGA
CTTCCAAAGA CAAAATTAAA AAATGGAGAT TTTTATTATA AATATGATGG GACTAATCAA
GTATTGAGAA TAGGTGCTGA AAATTCTTCT GGTACTATTG TGGAGCTCTA TCCGTCTCCA
GATCCAAACT ACAAGTAA
 
Protein sequence
MMAWLVKQVN SKHKGFTLIE MVIVVAIIAI LIAIAVPQVL KQINKSKIEA DKANAKNIAT 
AIQQWVSEGN VLNDTTDWVK IENKVPVSTG NGIVDYLGSG LPKTKLKNGD FYYKYDGTNQ
VLRIGAENSS GTIVELYPSP DPNYK