Gene Athe_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1647 
Symbol 
ID7409477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand+ 
Start bp1744532 
End bp1745083 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content32% 
IMG OID643716016 
Product2'-5' RNA ligase 
Protein accessionYP_002573514 
Protein GI222529632 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACAT TCATTGGTAT TGACTTCCCA AAAAGCTTAA AAGAGCAGAT TGTTGAAGTA 
CAAAGTTTTT TAAAGTCAAT CAGCAAAAAA GGCAGATGGA AGTACATTGA TAACTTTCAT 
TTAACCCTCA AGTTCTTAGG TGATATTGAA TATGAAAAGG TAGAAAAAAT CAGACAGGCG 
CTTGAAAAAA ATCTAAAAGA TTTTTCCCGT TTTTCATTGA AAATCTCATC CTGTGGATAT 
TTTAAAGGGC ATGGAAATTT GAGAGTTGTG TATCTAAAAC CAGATGGCAA TCTTGAAAAA 
CTCAATAACC TTTTTTCGCT TGTTGAGGAT GCAATGGCAT ATGTTGGATT TGAAAGAGAA 
AAAAGAGCGT ACACACCCCA TATAACAATT GCTCAGGATG TTGTGTTAAA TGAACCTTTT 
GAGAATTTTC AAAATTATGT TGAAAACTTT TCTTTTGATG AAATTCCTGT GGAAAAGGTC 
ATTCTTTTTT TGAGTGAGGA GATAGATAGA AAAAGAGTCT ATACACCTAT ATTTCATATT 
GAGCTTGTAT AA
 
Protein sequence
MRTFIGIDFP KSLKEQIVEV QSFLKSISKK GRWKYIDNFH LTLKFLGDIE YEKVEKIRQA 
LEKNLKDFSR FSLKISSCGY FKGHGNLRVV YLKPDGNLEK LNNLFSLVED AMAYVGFERE 
KRAYTPHITI AQDVVLNEPF ENFQNYVENF SFDEIPVEKV ILFLSEEIDR KRVYTPIFHI 
ELV