| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1578 |
|---|
| Symbol | |
|---|
| ID | 7409087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1670390 |
|---|
| End bp | 1672075 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 643715949 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002573447 |
|---|
| Protein GI | 222529565 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00291394 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGT TAAAGTCAAT AAAATCATTA ATGCCTTTTG TTAAACCGCA TGTTAGGATA
GGTTTAATTG GATTTCTCAT TCTACAAATT TATACAATAT TAATAAATGT TGCTCCGATT
ATTTCAAAAC AATTAGTTGA AGATTTGATA ACAAGAATAT CTTTACAAAA ATTAATGAAA
CAGTTAATCA TGTTTTCTTT GGTGTGGCTT TTGCAACCAG TGACCTCATA CTTAAGTTCC
TTGATGATAA TACGATTTAA GGAAAGAATA GTGCAGGAGT TAAGAAATGA ATTTTTTAAA
AAAGTTCTTT ATTCTCCTAT CACTGTTTTC GAAAAAAGTC CTCCGGGAAC TATATTAACA
CGTATTTTGA ATGAGACAGA AGAGATTGGA GAATTTATTC AAGATTTAAT CAACAATTTT
ACGAAAAATA TAATTATAAT TATATTTTCC TTTTCTATAA TGCTTTGGTT ATCACCATTT
TTGACCGTTG TTTTAGCGAT GATTTTGTTT TTATTTGCTG TTTTCATACT TAAGAAAGGA
CATCAAATAG GAATATTGCA AAAAGAGTCT CAGCTTTTGA TAGATAGAAT GAATACTTTT
GTACCAAGTG TAATTAGAAA TATAGTTTCG ATTAATTTAA ACAATGCCCA GAATTTTATA
TTTAACAAAT TTAATGAAAT AAACAGTAAA TTGAGAGATT TATCAGTTCA GATTTTTGCT
AAAATAATGT TGTTATCTAC CTATACTGCT CTGTTTGCTA TAGTGGCTAT TATCATTATA
TATGTTGGGG GCTCAATAGT AATTATAAAT GGGCATTCAA CTGTGGGAAT GATCGTAGCT
TTAAGTATGT ATTTTCAGAA TCTTATTGCT GCAAGTAGTG AGCTGTTTGA TAGTGGAATT
GAATTTAGAA GATTATTTCC TTTAATTGAA AGGCTAAATG AATTTTTATT AAATAATACC
AACAATATTA AAATAGAAAA TACTTCTGAA ATGTTGCATT TTGGAGAATT GGATTTTAAA
ATTGTTATAG AGGATTTGTG GTTTAAATAT GAAAATTCTG ACTCTTATGT ACTTCAAGGA
ATAAACTTGA TAATAGAACC AAATTCAATA ATTGGAATAA TCGGTGAGTC TGGGTGCGGC
AAATCAACTT TTCTGAAGTT ACTGTGTGGC TTGTATAAAC CTGAGAGAGG AAGTATTACA
ATTTGCGGGA AGAATATTTC CAAAATTGAT TTTAGAGAAT TTTGGAGATA TGTAAGTTAT
ATACCTCAAG AAGCAGAATT GATTTACAAC TTATCTATAA GAGAGAATAT AAAATTATCA
AATCTGAATA AAGTGGACAA TGATATAGAA AATATTTGTG AAATTTTAAA AATAAATAAA
AAAATTATTA AGCTTCCTTA TGGTTATGAC ACTATGTATG ATGAAAAAAT TAATTTTTCT
GGAGGTGAGA AGCAAAGAAT ACTCCTTGCA AGGGAGTTAT TAAAAGAGGC AAAAATTTTG
CTTTTTGATG AACCAACTTC TTCGCTTGAT GAGGAAAATG AGAGAATTTT ATGTGAGATA
TTGAAAGAGC TCAAAGAGAA TAGAATTATA ATTATTGTAA GTCATAGAAA AAAGATATTA
GAATATGCAG ATAAGATTTT TACTTTAAAC AATGGCAGAC TGTTTGAAAT GAATTTTACG
TTTTAA
|
|---|
| Protein sequence | MEKLKSIKSL MPFVKPHVRI GLIGFLILQI YTILINVAPI ISKQLVEDLI TRISLQKLMK
QLIMFSLVWL LQPVTSYLSS LMIIRFKERI VQELRNEFFK KVLYSPITVF EKSPPGTILT
RILNETEEIG EFIQDLINNF TKNIIIIIFS FSIMLWLSPF LTVVLAMILF LFAVFILKKG
HQIGILQKES QLLIDRMNTF VPSVIRNIVS INLNNAQNFI FNKFNEINSK LRDLSVQIFA
KIMLLSTYTA LFAIVAIIII YVGGSIVIIN GHSTVGMIVA LSMYFQNLIA ASSELFDSGI
EFRRLFPLIE RLNEFLLNNT NNIKIENTSE MLHFGELDFK IVIEDLWFKY ENSDSYVLQG
INLIIEPNSI IGIIGESGCG KSTFLKLLCG LYKPERGSIT ICGKNISKID FREFWRYVSY
IPQEAELIYN LSIRENIKLS NLNKVDNDIE NICEILKINK KIIKLPYGYD TMYDEKINFS
GGEKQRILLA RELLKEAKIL LFDEPTSSLD EENERILCEI LKELKENRII IIVSHRKKIL
EYADKIFTLN NGRLFEMNFT F
|
|---|
| |