| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3629 |
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| Symbol | |
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| ID | 7402541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012030 |
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| Strand | - |
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| Start bp | 388190 |
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| End bp | 392020 |
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| Gene Length | 3831 bp |
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| Protein Length | 1276 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643710164 |
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| Product | hypothetical protein |
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| Protein accession | YP_002567730 |
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| Protein GI | 222481494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTGA TTAAGAAGTT CCTTCAGAGC AGATACGACG ACGAGCAATA CGAAGCTCTG
CGATTCCATG CAGGCAACGA AAATACTCTG AGTCAGTGCG TCAGGGAGTA CGACGGGCGT
CTACTCAAAG TCCAACCGTA CAGTAAGTCG GTCGGGATCG AGAATGCAGA GCAACTCATT
TCCGTGTTCC ATAGTGCAGT CACCAAGCCG AGTTGGTTGA AAAAGAAGCT CGGGAAGACA
GAACAACCAC CACGATACTC GTTTGAAATG TGGTTCTCCG AAGGGAAGCT CCGGTTCATA
TTCTCGACCC CGAATCGCGA TGAAGAGGAG GAAATCCAAA AGCAGATCGG CGGGTTGTAT
CCAAACGCCA ACATCTCGTC TTCGAACCGA CTCATGCCGA AGATCCCCCG AGAAAGCTAT
ATCACAGGCG GGGAATTCAC GCTCTACCAC ACAAAGTACG CTCCGATTCG GTCGTTCAGT
GGAGAAGGAC CGTTTGAGAG AGACCCGTAT GAGGCGATCA CGAGCGAGCT GGTTGGTCAC
AAAAATCAAG CAGTCTTCTT CCAGGTAGTG TTCGAACCCG CCCACGAAAA TTGGACCGAC
GGAGAGGGCC GAACCGATCC ATCGGCCCAA TCCAAAGCCC GCGAACTCGA AGAAGGTCGG
CTCATCGACT CTCGGATCGA TCCAAAGATT CTCGACCCCA CTGACAAAGA TCGACGGACA
GGAAAGTACA TCGGCAATCT AGAAGGTACG CCAGCCTTTG AGTGTAATAT TCGGTTCTTC
GTTTTCGACC AGCGTGCAAA AACCACTGTC CGACATGCGA AGGGTATCGA GAACGTATTC
ACTTCGATTT ACCAGAATGC ACGACTCAAC CAACAGTTTA CTGCCACTCG GTTCAATGGT
GAAGAAGCGA AAGAACACTT CTTCGATGCA GCACTCCGAG AACTCAACCC CAACGGTACG
ATCCTAACTA GAGAGGAGTT GGCTGCGCTC GCACATCTCC CGAATGAGAG TATCCATACC
CAAAATGTCG ACTTCATCAA GACGGCATTT GGCAAGTCTG TCCCCGGTGG CGCATCCGTA
GAAGCCAAAG ACGGTAATCT ATCTGAGGCA ACCCACGATG ATGCGGGAGC CAATGAATTT
GCAGAGTTGG ATGAAAACCC ACCAGTCGAT CTAGGTGATG ATGCCGACGA TTTGACCACG
TACGAGAAGG CAAAACGGAT CGTCTCGTCA TCGTCGAAGT CTTATTACCG ACGCTCGGTG
TCGCCATCTG ACTACCCAGA GACTGTAACT ACCAAGACGA TAAGACAAGA AGCAGAAACT
GAGGAAGAAG CAGAGCAGAC CATCAATGTG GTTCTCGAGT ACGCAGCAGC GTACGAACAA
GGGGCCATCA ATCACGATGA AATGCGTGCC CAAATGCCCA CTGAAGAAAC CTACGAGCAG
CTGCTCAACG TCATTGAAAA TCACATCGAA GAATCCTACC TGATCCGTGC AAAGCAGGCT
GATGCTGCAC AAGGCCGCTC CGAAGCAGAC CAAGGAGAGC CACAGCCACA GCCACAGTCC
CGATCGTCAC CAGCATCTGC AGGTTCGCCG GCAACAACCA GTGAACCAGA AAGCGACGAA
ACGCCCGCCC TAACAGACGG ATTGGGAACA CAAGACAGCC TCCCGGTGAG TGCTGAGGGT
GGTGGACAAG CGCAGAATGG AGCAGGAGGG ACGGCGGCTT CGAGCGCGTC GACTACTGGA
CAAGACAACC TCCCTGCCAA GCGCGGTAAA TTCGCCGTCA ATTTCGTCGA TACGGAATAC
TGCCAAACCC GATCGGAGAG CGGTCGGTAC TTGAATATGA ATTTCAAGCA GACTGGTCAC
GACGGTAACC TCTACATGGG TGAAGACGTT CGGAAACTTT TCGTCGACAA ACACCGCGAA
GACCCGAGTG CGAATATCTG GTTGGGGTAT CAATCGCGGG GGAACAACCC GATGCGGGAA
GTCGGCATGG AAGAGTTCTC GTGGTTCCGT CATCTCTCGA TGTTCGGGAC GACAGGCATG
GGCAAGACGA CTTCTCAGAA GAACCTCATC AACCAGATCG TTCGGAAGGG CTACGGCTGT
GTCGTCATTG ATCCGAAGGG CGATATGGCG GTCGAGCTCA TGCAGGAAAT CCCCGAAGAC
AGATTAGACG ACGTAATCTG GATCGAACCG GGTAGTATCA AACACCCTGA CAAGGTGGCC
GCGATCAATT TCCTCGACCC ATCGGTTCCA AAAGACCACC CACGGTACGA CCGAGAGGTC
GAATCCATCG TCGACGACCT TCAAGCAATT CTGAAAGCCG AGGGCTACTG GGGGGCGAAG
ATGGCCGGGA TTACGAAGAA CATCACGCGG GCGATGATCC GCTCGAACAA TCCATATACA
CTTTATGACA TGTACAACGT CCTCGGCCGC GAGGAAAAAC GCTGGAACTT CGCCCGCTCG
CTCGAACGCG AAGGCGTCGA GCTGGACGAT ACACAAACGG GGAGTATCAT AACCGACATC
AAGCAGTACT CCCGCCGTAT TGCGGAAATG GACCCAGACG AGGTTGACCC CGTCGTCAGA
CGCCTTCAAG ACTGGGCAGA GAGCCCAATC AGCAAGGAGA TCGTTTCTCA TCGCAATAGC
TCGGTCTCGA TCAACGATGC TGTCGAGGAA GGCAAGATCA TTCTTGTTCG AAACACCGTC
TCGAACGAAG AAGTCAAACG GGTAGTGTCG ACAGCAATTA TCCGGCGTGT CTGGGCGACG
ATCCAATCCC GTGCCGAGGA AGAAGAAGAA GAGGACCGTG AACCGTTCTT CACGCTGATC
GACGAGTTCG ACGACGTCGT CAGTGAGGAT ATGAACATCA AAAAGATGTT GACCAAGGCA
CGCTCCGGAA AAATGTCGGT GTGTCTGGCT TGTCAGAACC CCGCCCAGAT CGAAGAAGAC
CACGAGGGGA TTCTCAGACA GATCTTTTCG AATACGGACA CGATGGTCTC GTTCGGTGTT
CGAGGACCTG ACGACGGTGA GTTAATTGCC AAGCGGATGG GCGAAGACAT CGATAAATAC
GACATCATGG GGATGCCGGA GTTCCGAGTG CTGACTCGCG TGACCTACAT GGGCGAGCAA
GGTCGAGAGG TAAGTCCTGC ATTGGGGCTT CATACCTTCC CCGACTACCC GCCGCTGCGA
ACGAAAGAAG AGGCCCACGA AGCTATCGAC CGGAGCCTTG ATCGATACGG CGTCGAGCCG
ATGGCAAACT CTCCGGCTGA GACTGATCTG CTCATCTCGG GTGGCGGGAT GCAACAACAG
ACCGTCGTCG ACTTCCTGGA GCTCGTCTGG GGCGAACAAC TCAAACGCGG GGCCGAAACA
ATCACTGTCG AATCGTTCGC CGACCGCTTC GAGGAGGCAT TGGGCCACCC AATCGAGGAA
TTCCCCAGTG GGATCGGCGT ACCTCCTGAA ATGATCAACG TCCACAACGT CTATCTGGAA
GACGACGACG AGGAAGACGA CCCCTTCTCG ATGGGCGATG ATTTCGCTTC TGAAGAAGAT
AACCGGGATC TGATCGCCTA CCAGACAGCA AAGCGAATCC ACATCCAAAA GCCCGAGGCG
GAGGTCTCAA TCACTGCTGA AGGTATCGAT GCGATTCTCC AGCAAGACAG CGGTCGAGTC
CAACCAACCG AGTCACACCG CAAAACGATC CACGACGGGT TCCGCTGGTT CAGTCGACTC
GGCCTCAACC TCAGTGTTCC AATTCAAGTC AATTCAGAAT CAGTACCTCA CAAAGCATCC
TCGGCTAGCT GTTTCTGCGG CCTGAGTTCT GTGTCGAAGC GGTTGTACTG A
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| Protein sequence | MNVIKKFLQS RYDDEQYEAL RFHAGNENTL SQCVREYDGR LLKVQPYSKS VGIENAEQLI
SVFHSAVTKP SWLKKKLGKT EQPPRYSFEM WFSEGKLRFI FSTPNRDEEE EIQKQIGGLY
PNANISSSNR LMPKIPRESY ITGGEFTLYH TKYAPIRSFS GEGPFERDPY EAITSELVGH
KNQAVFFQVV FEPAHENWTD GEGRTDPSAQ SKARELEEGR LIDSRIDPKI LDPTDKDRRT
GKYIGNLEGT PAFECNIRFF VFDQRAKTTV RHAKGIENVF TSIYQNARLN QQFTATRFNG
EEAKEHFFDA ALRELNPNGT ILTREELAAL AHLPNESIHT QNVDFIKTAF GKSVPGGASV
EAKDGNLSEA THDDAGANEF AELDENPPVD LGDDADDLTT YEKAKRIVSS SSKSYYRRSV
SPSDYPETVT TKTIRQEAET EEEAEQTINV VLEYAAAYEQ GAINHDEMRA QMPTEETYEQ
LLNVIENHIE ESYLIRAKQA DAAQGRSEAD QGEPQPQPQS RSSPASAGSP ATTSEPESDE
TPALTDGLGT QDSLPVSAEG GGQAQNGAGG TAASSASTTG QDNLPAKRGK FAVNFVDTEY
CQTRSESGRY LNMNFKQTGH DGNLYMGEDV RKLFVDKHRE DPSANIWLGY QSRGNNPMRE
VGMEEFSWFR HLSMFGTTGM GKTTSQKNLI NQIVRKGYGC VVIDPKGDMA VELMQEIPED
RLDDVIWIEP GSIKHPDKVA AINFLDPSVP KDHPRYDREV ESIVDDLQAI LKAEGYWGAK
MAGITKNITR AMIRSNNPYT LYDMYNVLGR EEKRWNFARS LEREGVELDD TQTGSIITDI
KQYSRRIAEM DPDEVDPVVR RLQDWAESPI SKEIVSHRNS SVSINDAVEE GKIILVRNTV
SNEEVKRVVS TAIIRRVWAT IQSRAEEEEE EDREPFFTLI DEFDDVVSED MNIKKMLTKA
RSGKMSVCLA CQNPAQIEED HEGILRQIFS NTDTMVSFGV RGPDDGELIA KRMGEDIDKY
DIMGMPEFRV LTRVTYMGEQ GREVSPALGL HTFPDYPPLR TKEEAHEAID RSLDRYGVEP
MANSPAETDL LISGGGMQQQ TVVDFLELVW GEQLKRGAET ITVESFADRF EEALGHPIEE
FPSGIGVPPE MINVHNVYLE DDDEEDDPFS MGDDFASEED NRDLIAYQTA KRIHIQKPEA
EVSITAEGID AILQQDSGRV QPTESHRKTI HDGFRWFSRL GLNLSVPIQV NSESVPHKAS
SASCFCGLSS VSKRLY
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