Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_3629 |
Symbol | |
ID | 7402541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012030 |
Strand | - |
Start bp | 388190 |
End bp | 392020 |
Gene Length | 3831 bp |
Protein Length | 1276 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643710164 |
Product | hypothetical protein |
Protein accession | YP_002567730 |
Protein GI | 222481494 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTGA TTAAGAAGTT CCTTCAGAGC AGATACGACG ACGAGCAATA CGAAGCTCTG CGATTCCATG CAGGCAACGA AAATACTCTG AGTCAGTGCG TCAGGGAGTA CGACGGGCGT CTACTCAAAG TCCAACCGTA CAGTAAGTCG GTCGGGATCG AGAATGCAGA GCAACTCATT TCCGTGTTCC ATAGTGCAGT CACCAAGCCG AGTTGGTTGA AAAAGAAGCT CGGGAAGACA GAACAACCAC CACGATACTC GTTTGAAATG TGGTTCTCCG AAGGGAAGCT CCGGTTCATA TTCTCGACCC CGAATCGCGA TGAAGAGGAG GAAATCCAAA AGCAGATCGG CGGGTTGTAT CCAAACGCCA ACATCTCGTC TTCGAACCGA CTCATGCCGA AGATCCCCCG AGAAAGCTAT ATCACAGGCG GGGAATTCAC GCTCTACCAC ACAAAGTACG CTCCGATTCG GTCGTTCAGT GGAGAAGGAC CGTTTGAGAG AGACCCGTAT GAGGCGATCA CGAGCGAGCT GGTTGGTCAC AAAAATCAAG CAGTCTTCTT CCAGGTAGTG TTCGAACCCG CCCACGAAAA TTGGACCGAC GGAGAGGGCC GAACCGATCC ATCGGCCCAA TCCAAAGCCC GCGAACTCGA AGAAGGTCGG CTCATCGACT CTCGGATCGA TCCAAAGATT CTCGACCCCA CTGACAAAGA TCGACGGACA GGAAAGTACA TCGGCAATCT AGAAGGTACG CCAGCCTTTG AGTGTAATAT TCGGTTCTTC GTTTTCGACC AGCGTGCAAA AACCACTGTC CGACATGCGA AGGGTATCGA GAACGTATTC ACTTCGATTT ACCAGAATGC ACGACTCAAC CAACAGTTTA CTGCCACTCG GTTCAATGGT GAAGAAGCGA AAGAACACTT CTTCGATGCA GCACTCCGAG AACTCAACCC CAACGGTACG ATCCTAACTA GAGAGGAGTT GGCTGCGCTC GCACATCTCC CGAATGAGAG TATCCATACC CAAAATGTCG ACTTCATCAA GACGGCATTT GGCAAGTCTG TCCCCGGTGG CGCATCCGTA GAAGCCAAAG ACGGTAATCT ATCTGAGGCA ACCCACGATG ATGCGGGAGC CAATGAATTT GCAGAGTTGG ATGAAAACCC ACCAGTCGAT CTAGGTGATG ATGCCGACGA TTTGACCACG TACGAGAAGG CAAAACGGAT CGTCTCGTCA TCGTCGAAGT CTTATTACCG ACGCTCGGTG TCGCCATCTG ACTACCCAGA GACTGTAACT ACCAAGACGA TAAGACAAGA AGCAGAAACT GAGGAAGAAG CAGAGCAGAC CATCAATGTG GTTCTCGAGT ACGCAGCAGC GTACGAACAA GGGGCCATCA ATCACGATGA AATGCGTGCC CAAATGCCCA CTGAAGAAAC CTACGAGCAG CTGCTCAACG TCATTGAAAA TCACATCGAA GAATCCTACC TGATCCGTGC AAAGCAGGCT GATGCTGCAC AAGGCCGCTC CGAAGCAGAC CAAGGAGAGC CACAGCCACA GCCACAGTCC CGATCGTCAC CAGCATCTGC AGGTTCGCCG GCAACAACCA GTGAACCAGA AAGCGACGAA ACGCCCGCCC TAACAGACGG ATTGGGAACA CAAGACAGCC TCCCGGTGAG TGCTGAGGGT GGTGGACAAG CGCAGAATGG AGCAGGAGGG ACGGCGGCTT CGAGCGCGTC GACTACTGGA CAAGACAACC TCCCTGCCAA GCGCGGTAAA TTCGCCGTCA ATTTCGTCGA TACGGAATAC TGCCAAACCC GATCGGAGAG CGGTCGGTAC TTGAATATGA ATTTCAAGCA GACTGGTCAC GACGGTAACC TCTACATGGG TGAAGACGTT CGGAAACTTT TCGTCGACAA ACACCGCGAA GACCCGAGTG CGAATATCTG GTTGGGGTAT CAATCGCGGG GGAACAACCC GATGCGGGAA GTCGGCATGG AAGAGTTCTC GTGGTTCCGT CATCTCTCGA TGTTCGGGAC GACAGGCATG GGCAAGACGA CTTCTCAGAA GAACCTCATC AACCAGATCG TTCGGAAGGG CTACGGCTGT GTCGTCATTG ATCCGAAGGG CGATATGGCG GTCGAGCTCA TGCAGGAAAT CCCCGAAGAC AGATTAGACG ACGTAATCTG GATCGAACCG GGTAGTATCA AACACCCTGA CAAGGTGGCC GCGATCAATT TCCTCGACCC ATCGGTTCCA AAAGACCACC CACGGTACGA CCGAGAGGTC GAATCCATCG TCGACGACCT TCAAGCAATT CTGAAAGCCG AGGGCTACTG GGGGGCGAAG ATGGCCGGGA TTACGAAGAA CATCACGCGG GCGATGATCC GCTCGAACAA TCCATATACA CTTTATGACA TGTACAACGT CCTCGGCCGC GAGGAAAAAC GCTGGAACTT CGCCCGCTCG CTCGAACGCG AAGGCGTCGA GCTGGACGAT ACACAAACGG GGAGTATCAT AACCGACATC AAGCAGTACT CCCGCCGTAT TGCGGAAATG GACCCAGACG AGGTTGACCC CGTCGTCAGA CGCCTTCAAG ACTGGGCAGA GAGCCCAATC AGCAAGGAGA TCGTTTCTCA TCGCAATAGC TCGGTCTCGA TCAACGATGC TGTCGAGGAA GGCAAGATCA TTCTTGTTCG AAACACCGTC TCGAACGAAG AAGTCAAACG GGTAGTGTCG ACAGCAATTA TCCGGCGTGT CTGGGCGACG ATCCAATCCC GTGCCGAGGA AGAAGAAGAA GAGGACCGTG AACCGTTCTT CACGCTGATC GACGAGTTCG ACGACGTCGT CAGTGAGGAT ATGAACATCA AAAAGATGTT GACCAAGGCA CGCTCCGGAA AAATGTCGGT GTGTCTGGCT TGTCAGAACC CCGCCCAGAT CGAAGAAGAC CACGAGGGGA TTCTCAGACA GATCTTTTCG AATACGGACA CGATGGTCTC GTTCGGTGTT CGAGGACCTG ACGACGGTGA GTTAATTGCC AAGCGGATGG GCGAAGACAT CGATAAATAC GACATCATGG GGATGCCGGA GTTCCGAGTG CTGACTCGCG TGACCTACAT GGGCGAGCAA GGTCGAGAGG TAAGTCCTGC ATTGGGGCTT CATACCTTCC CCGACTACCC GCCGCTGCGA ACGAAAGAAG AGGCCCACGA AGCTATCGAC CGGAGCCTTG ATCGATACGG CGTCGAGCCG ATGGCAAACT CTCCGGCTGA GACTGATCTG CTCATCTCGG GTGGCGGGAT GCAACAACAG ACCGTCGTCG ACTTCCTGGA GCTCGTCTGG GGCGAACAAC TCAAACGCGG GGCCGAAACA ATCACTGTCG AATCGTTCGC CGACCGCTTC GAGGAGGCAT TGGGCCACCC AATCGAGGAA TTCCCCAGTG GGATCGGCGT ACCTCCTGAA ATGATCAACG TCCACAACGT CTATCTGGAA GACGACGACG AGGAAGACGA CCCCTTCTCG ATGGGCGATG ATTTCGCTTC TGAAGAAGAT AACCGGGATC TGATCGCCTA CCAGACAGCA AAGCGAATCC ACATCCAAAA GCCCGAGGCG GAGGTCTCAA TCACTGCTGA AGGTATCGAT GCGATTCTCC AGCAAGACAG CGGTCGAGTC CAACCAACCG AGTCACACCG CAAAACGATC CACGACGGGT TCCGCTGGTT CAGTCGACTC GGCCTCAACC TCAGTGTTCC AATTCAAGTC AATTCAGAAT CAGTACCTCA CAAAGCATCC TCGGCTAGCT GTTTCTGCGG CCTGAGTTCT GTGTCGAAGC GGTTGTACTG A
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Protein sequence | MNVIKKFLQS RYDDEQYEAL RFHAGNENTL SQCVREYDGR LLKVQPYSKS VGIENAEQLI SVFHSAVTKP SWLKKKLGKT EQPPRYSFEM WFSEGKLRFI FSTPNRDEEE EIQKQIGGLY PNANISSSNR LMPKIPRESY ITGGEFTLYH TKYAPIRSFS GEGPFERDPY EAITSELVGH KNQAVFFQVV FEPAHENWTD GEGRTDPSAQ SKARELEEGR LIDSRIDPKI LDPTDKDRRT GKYIGNLEGT PAFECNIRFF VFDQRAKTTV RHAKGIENVF TSIYQNARLN QQFTATRFNG EEAKEHFFDA ALRELNPNGT ILTREELAAL AHLPNESIHT QNVDFIKTAF GKSVPGGASV EAKDGNLSEA THDDAGANEF AELDENPPVD LGDDADDLTT YEKAKRIVSS SSKSYYRRSV SPSDYPETVT TKTIRQEAET EEEAEQTINV VLEYAAAYEQ GAINHDEMRA QMPTEETYEQ LLNVIENHIE ESYLIRAKQA DAAQGRSEAD QGEPQPQPQS RSSPASAGSP ATTSEPESDE TPALTDGLGT QDSLPVSAEG GGQAQNGAGG TAASSASTTG QDNLPAKRGK FAVNFVDTEY CQTRSESGRY LNMNFKQTGH DGNLYMGEDV RKLFVDKHRE DPSANIWLGY QSRGNNPMRE VGMEEFSWFR HLSMFGTTGM GKTTSQKNLI NQIVRKGYGC VVIDPKGDMA VELMQEIPED RLDDVIWIEP GSIKHPDKVA AINFLDPSVP KDHPRYDREV ESIVDDLQAI LKAEGYWGAK MAGITKNITR AMIRSNNPYT LYDMYNVLGR EEKRWNFARS LEREGVELDD TQTGSIITDI KQYSRRIAEM DPDEVDPVVR RLQDWAESPI SKEIVSHRNS SVSINDAVEE GKIILVRNTV SNEEVKRVVS TAIIRRVWAT IQSRAEEEEE EDREPFFTLI DEFDDVVSED MNIKKMLTKA RSGKMSVCLA CQNPAQIEED HEGILRQIFS NTDTMVSFGV RGPDDGELIA KRMGEDIDKY DIMGMPEFRV LTRVTYMGEQ GREVSPALGL HTFPDYPPLR TKEEAHEAID RSLDRYGVEP MANSPAETDL LISGGGMQQQ TVVDFLELVW GEQLKRGAET ITVESFADRF EEALGHPIEE FPSGIGVPPE MINVHNVYLE DDDEEDDPFS MGDDFASEED NRDLIAYQTA KRIHIQKPEA EVSITAEGID AILQQDSGRV QPTESHRKTI HDGFRWFSRL GLNLSVPIQV NSESVPHKAS SASCFCGLSS VSKRLY
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