Gene Hlac_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3605 
Symbol 
ID7402477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp358484 
End bp359800 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content52% 
IMG OID643710142 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002567708 
Protein GI222481472 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGGTTC AAGACGCGAA TGCGTCTTCA GCGATTTCTG AGACAGCCAT CGAGACGTTT 
GATTTGGGAA CGTACATCGG TGCTAAACTG ACCGTTAACA ACGAACCATA CGGGACGATT
TGCTTCGCCG ATAAAGAAGA ACGAGGCACT ACGTTCAGTG ATGCTGAAAC ACACTTCGTG
GAACTGCTGG CTCATCTGGC CAGAAACGCG ATTGAACGAC GGACTTACGA ACAGGAACTC
GAAGAGCGTG AAGCTCGTCT TGATGAACGA GAAGAAGAGC AGCGGGCCCT CATCGATGCC
AGTTTCGATC TAGTGTTCCG TATCGATACT GACGGACAGT TCACGTTTAT ATCAGATACT
GCAGAAGATC TCTTGGGCTA CACACCAGAG GAACTCGTTG ATCGCCCGTT TAGCTTGTTA
CTCCCAGATA ACGCCTCCGT TGAGCTAGCA ACAGAGACCT ACGAACAAGC ATTAGCTGGT
CAGTCCGTCG AAGAAGAATA TCTTGTCGTT GAATCCAAGA CAGGCGACCA AGTCGTCTTA
GATGTTCGAA AGGTCCCAAT CTACGAGAGC ACCGTTCCGA AAGAAAACCG AACAACCGCT
GATATCGTCG GTGTTCAAGG GGCTGCAAAA GCAGCAACTG AACGGTTTCA CCGCGAACGA
CTGAACCACG TTCTGAATCG TGTCCTCAGA CATAACCTCC GGAACGATAT GAACGTCATC
GGCGGATTTT CAGAGGTCCT CGAAAAACGG TTGTCTGGCG AGAACGCGGA GCTGGCCGAG
CGAATTAACA GGACAAGCGA CCGACTGTCA CAGCTCTCTG AGTCGACTCG CAAGCTAAGT
GAGAATATGG ACCTCGCTCC TGAGCTGGAG CCCATGGATA TCACACCCAT GGTGGAGCGT
GCGGCCAGCC AAATCACCGA GCGATATCCC GACGCAGATA TCACGGTGAA AATGCCCAGC
AAGATAGTGG CGCAGAGTAC CCTCAGTTTG GAAACGGCTG TCTGGGAATT ACTCGATAAT
GCCGCTAAGC ACGCGGGAGA CTATCCAGAG GTGTCAGTCG AAGTAACGAC GATAGAAGAT
CGGGTTGCAA TACGGATTTT TGACGACGGC CCCGGGTTGC CGCCCAGCGA GCGGTCGGTA
CTGACAACTG GTGAAGAGAC GCCGCTCGTT CATGGCCAAG GACTGGGATT GTGGCTCGTC
TACTGGATTA TTGAGGGCCT GAACGGCGAT CTGCAGCTAC ACAATGACGA TCCTAGAACG
TGTATTGAGC TCCGACTCCA TGCTGGTGAA GTGCCTTCAG AATCCTCTGG TGAATAG
 
Protein sequence
MAVQDANASS AISETAIETF DLGTYIGAKL TVNNEPYGTI CFADKEERGT TFSDAETHFV 
ELLAHLARNA IERRTYEQEL EEREARLDER EEEQRALIDA SFDLVFRIDT DGQFTFISDT
AEDLLGYTPE ELVDRPFSLL LPDNASVELA TETYEQALAG QSVEEEYLVV ESKTGDQVVL
DVRKVPIYES TVPKENRTTA DIVGVQGAAK AATERFHRER LNHVLNRVLR HNLRNDMNVI
GGFSEVLEKR LSGENAELAE RINRTSDRLS QLSESTRKLS ENMDLAPELE PMDITPMVER
AASQITERYP DADITVKMPS KIVAQSTLSL ETAVWELLDN AAKHAGDYPE VSVEVTTIED
RVAIRIFDDG PGLPPSERSV LTTGEETPLV HGQGLGLWLV YWIIEGLNGD LQLHNDDPRT
CIELRLHAGE VPSESSGE