Gene Hlac_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3589 
Symbol 
ID7402504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand- 
Start bp341444 
End bp342091 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content46% 
IMG OID643710127 
ProductProtein of unknown function DUF1628 
Protein accessionYP_002567693 
Protein GI222481457 
COG category[S] Function unknown 
COG ID[COG3430] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAC GGGTGAGGGA CCTTATTCAG TGGACAGGGG TTGACAGGTC AGTGTCTCCT 
GTAATTGGTG TCATTTTAGT TGTCGCACTA ACACTAATTA TCGCTGCAGC TATTGGTGCG 
AGTGCGTTTG GGCTGGCCGG TTCATTATCT GAGAGCCCAC CACAAGCGAC TATCGACGCC 
GAGCACGAAG ATCGAATAAT AAATGATGGC GAGGGACATT CGGCGGAGAT GACCATTGTC 
ACACTCACCC ATGAGGGCGG TGATAATATT GATAAAGATA ATATAAATGT GACAATCAAC 
TGCGAGCCAG CATGGGCAAC ACCTGATCCC CCCGAAGAAT ACTACGAGTG GGAAGCATAT 
GATTACAATC ACATTGTTAA TCCGTGGGAA ACTACGGAAT CAGATCAAAT CTCCTCAGGT 
GATCAAACAG TTATCGCCAT CAAGACTAAC GAAATAGTGG AGAGTAATAA CCCTACTATC 
GATAGAACGA CTTTCAGTTT CGATGATGGC GGAATTAATC TTTGGGAGCC AATCCCGACA 
GTCACTTACG ATCTAAATAA GGTTGAACTG GAGTCGGGCG ATACTGTCCG CATGATCTGG 
GAGTCGGGCG ATACGTCGAC ACCACTAGTT GAGTACGAGA TAAAGTAG
 
Protein sequence
MHKRVRDLIQ WTGVDRSVSP VIGVILVVAL TLIIAAAIGA SAFGLAGSLS ESPPQATIDA 
EHEDRIINDG EGHSAEMTIV TLTHEGGDNI DKDNINVTIN CEPAWATPDP PEEYYEWEAY 
DYNHIVNPWE TTESDQISSG DQTVIAIKTN EIVESNNPTI DRTTFSFDDG GINLWEPIPT 
VTYDLNKVEL ESGDTVRMIW ESGDTSTPLV EYEIK