Gene Hlac_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3579 
Symbol 
ID7402494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp333251 
End bp333529 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content53% 
IMG OID643710117 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002567683 
Protein GI222481447 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGC GCTTGGCAAT AGCCTACGAT GTGAGTGAGG ATTCGAACCG CAGGCAAGTA 
TATCGAACGC TCCAGAGGTA TGGGGCATGG CGGCAGTACA GTGTCTTCGA GGTCGACGTG
ACTAAGACAG ATCGCGTTGA GCTTGAAGAT GAACTCGAAT CTCACATCGA GCCATCGGAC
GGTGATCGAA TTCGTATTTA TCGGCTCTGT CAGTCCTGCC AAGACAATAC AACCGATCTC
GGGTCCGATC CCCCCGGCGA ACAATCGAAC GTTCTCTGA
 
Protein sequence
MTMRLAIAYD VSEDSNRRQV YRTLQRYGAW RQYSVFEVDV TKTDRVELED ELESHIEPSD 
GDRIRIYRLC QSCQDNTTDL GSDPPGEQSN VL