Gene Hlac_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3552 
Symbol 
ID7402395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand+ 
Start bp299284 
End bp300408 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content66% 
IMG OID643710090 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_002567656 
Protein GI222481420 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTTA CCCCCCAAAC CGATTGGCGC GCTAGCATCG AGCGACGGCT GACCAGAACA 
CAGAAGTTCA TCGACGACAC CGACCCGGAG GCGCTGGCAG TGGTCCTCGT GTCGATGGGG 
TCGCTACTGG CCGCCTTCGT CGGGTTCCTG CTGGCGTCGC CGTGGACGGC TGTCCCGCTC 
GGGACATTTC TGATCGCCAC CGGCTACGGC TGGGCGCGCC ATCAGGCGCT CGTCGCCCGC 
GCGGTCACCT TCGCGATGAC GACGGTGACG CTCGTGACGC TCGGGCTCAT CGTCGTCTTC 
ATCTTCGCCG AATCGATCCC GGCGTTTCAG TACGAGACGG CGAGCGTGTT CGGCGTCTCT 
GTTCCGGGAC TCGGGATGTT TACACAGGCC CGTTGGGACG CCGTCTCGGA GCCCGTTCGC 
TACTCGCTGC TCCCGATGAT CCATGGGACG GTGATGGTGA CCACCATCGC GACGCTTGTG 
GCGGCCCCGC TCGGCGTCGC CGCGGCGCTG TTCATCGCCG AGATCGCCCC GCCGCGGGTT 
CGCGAGCTCG TCAAGCCGGG GATCGAGGTG TTGGCGGGCA TCCCCTCGAT CGTTTACGGT 
TTCATCGGCT TCACCGTGAT CAACCCGTGG GCGGGCGGCG CGTTCGCACT CAATGGCGGG 
TCGACGTATC TGTTCGTTGG CATCGTTGTC GGGCTAATGG CGTTGCCGAC CGTCGTCTCC 
GTCGCTGAGG ACGCGCTCAC GAGCGTCCCG AGCGTGATGA AAGACGGGTC GCTCGCCCTC 
GGGGCGACCG ACTGGCAGTC GATGACCTCC ATTACGCTTC CCGCGGCCTT CTCGGGCGTC 
TCGGCGGCCG TGCTCCTCGG TGTCGGACGC GCCATCGGTG AGACGATGGC CGCGACGGTG 
ATGCTGGCCG GCGTTCCGCG GATCAGCGAG CCGCTCGTGA ACGTCTTCTA CGGCTACGAG 
ACGCTCACCT CGCTCATCGC TCGCGGCTAC GGTAGCGCAA ACGGCGTTCA CGAGAGCGCA 
CTGTTCGCCG CCGGCGTCGT CCTGTTCGTG ACCGTGTTGT GTCTGAGTCT CGGCTCGCAG 
TACATCGAGG CGCGTATGCG TCGCCGCCTC GGGGGTGTCG AATGA
 
Protein sequence
MSLTPQTDWR ASIERRLTRT QKFIDDTDPE ALAVVLVSMG SLLAAFVGFL LASPWTAVPL 
GTFLIATGYG WARHQALVAR AVTFAMTTVT LVTLGLIVVF IFAESIPAFQ YETASVFGVS 
VPGLGMFTQA RWDAVSEPVR YSLLPMIHGT VMVTTIATLV AAPLGVAAAL FIAEIAPPRV 
RELVKPGIEV LAGIPSIVYG FIGFTVINPW AGGAFALNGG STYLFVGIVV GLMALPTVVS 
VAEDALTSVP SVMKDGSLAL GATDWQSMTS ITLPAAFSGV SAAVLLGVGR AIGETMAATV 
MLAGVPRISE PLVNVFYGYE TLTSLIARGY GSANGVHESA LFAAGVVLFV TVLCLSLGSQ 
YIEARMRRRL GGVE