Gene Hlac_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3543 
Symbol 
ID7402386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand- 
Start bp291414 
End bp291803 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content55% 
IMG OID643710081 
Productputative transcriptional regulator, CopG family 
Protein accessionYP_002567647 
Protein GI222481411 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACAA GTTTCAGTAT TCCAGATCCG ACCGTCGAAG AGTTCGATCA GGTGTGGCAA 
GACCAGGGAC TCGACAATCG GTCGCGGGCA GTTCGCGAAG CAATGCAGGA GTATATCGAG 
TCCCATTCAC GGCTTGAAGA GCTCACTGCA GACGTTGTCG CGCTCGTTGC CTTCGACTAT 
CGTCATCACG AGGTGATCGG GGAGCTCCAC GGCGTCCAGC ACGAGTACCA GGACGTGATT 
CTCAACACGA GTCACACGCA CCAGGGAGAA TGGTGTCTCG AATCCGTATA CTGTCAGGGA 
GGCGGCGAGC GCGTTCGAGA ATTAACGTAC CGACTCCGTA ACTTCGACGG CGTGAACCGG 
GTCAAAGTCA TGATCATCCG AGACAACTGA
 
Protein sequence
MRTSFSIPDP TVEEFDQVWQ DQGLDNRSRA VREAMQEYIE SHSRLEELTA DVVALVAFDY 
RHHEVIGELH GVQHEYQDVI LNTSHTHQGE WCLESVYCQG GGERVRELTY RLRNFDGVNR 
VKVMIIRDN