| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3270 |
|---|
| Symbol | |
|---|
| ID | 7402416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012030 |
|---|
| Strand | + |
|---|
| Start bp | 5437 |
|---|
| End bp | 6732 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643709827 |
|---|
| Product | amidase, hydantoinase/carbamoylase family |
|---|
| Protein accession | YP_002567393 |
|---|
| Protein GI | 222481157 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG ATCTGCCTGT CGACGGCGAC AGACTCCGTC AAGACATCGA GCGAACGGCG
GAGTTCGGTG CGGTCGAATC GGACGACGGA CGCGGCCGGA CAGCACTCCC CGCCGATGAG
GCAAACGGTC AAGCTCGTGA TTACCTCGTC GACCAACTCG AAGCCGCTGG ACTCGATATT
CGTATCGACG CCGTCGGCAA CATCGCTGGT CGGTGGACGC CGCCGAGCGC CGACTCGGAT
GCAGCAGCCG TCGCCGCCGG CAGCCATCTC GACTCAGTCC CTCGCGGCGG CATCTTTGAT
GGCCCGCTCG GGGTGTTCGC GGCACTGGAA GGTGTCCGCG CGATACAGGA GAGTACTCTC
GAACCCACAC GTCCGATTGA GGTCGTCTGC TTTACGGGCG AAGAGGGAAC GCGGTTCGCC
GATGGCGTCC TCGGGTCGAC CGTGGCGACA GGCAAGCGGA GTGTCGGCGA GATGCTCACG
ATGACTGATG GTACCGTGAC ACTCGAAACG GCGCTTCAAA ATGTCGGATA CCACGGGACC
GACCGCATCG ATGCAAGCGA GTGGGACACG TGGCTCGAAC TCCACATCGA GCAGACGACG
CGCCTCAGAG ACGCTGGTAT TCCGCTTGGC ATCGTCACCG ACATCACCGG TACCGCACGC
TGCCACGTTA CCATCGAGGG GGAACCCGAC CACTCCGGCA CGACGTCCAT GTCCGAACGG
CGAGACGCGC TCGCGGCCGC GAGTGAACTC GTTCTCGCTG TCGAGAGCTG TGCAAGTGAT
ATGGCTGCCG AGGGTACTGG CACTGCTGTC GGTACCGTGG GCCATCTCAG CGTCGATCCG
AACACGGTCA ATGTCGTCCC TGGCGGGGTA TCGCTCCGAA TCGACCTCCG GTCGACCGAT
CGACCCGAGA TCAAGACTCA GCTCGATACG GTTCGAGACT CGTTGGCCGA TATCGAAGCC
CAGAGGGACC TGTCGACCAC GTTCGATTGT ACGTACGACA TCCCACCAAC CCCACTTTCG
GAACGCTGTA GGCGGACGGT CGCAGACGCC GCCCACGACC AAGGCGTCGA GACGACTTCC
GTGTACTCCG GTGCGGGCCA CGACACCATG CAAGTCGCCG ACGTCACCGA CGCCGCACTT
CTCTTTGTCG CCTCCCAGAA CGGCCATTCA CACTCCCCGA AGGAGCGCGC TGACTGGGAC
GACTGCACCA CCGCAACGCG TGTCCTTGCT GACTCGCTTG CACGACTCGC ATCGACCAAC
GATCAACGAC CACTAAATCC ACAAGACAAA TGTTAG
|
|---|
| Protein sequence | MSADLPVDGD RLRQDIERTA EFGAVESDDG RGRTALPADE ANGQARDYLV DQLEAAGLDI
RIDAVGNIAG RWTPPSADSD AAAVAAGSHL DSVPRGGIFD GPLGVFAALE GVRAIQESTL
EPTRPIEVVC FTGEEGTRFA DGVLGSTVAT GKRSVGEMLT MTDGTVTLET ALQNVGYHGT
DRIDASEWDT WLELHIEQTT RLRDAGIPLG IVTDITGTAR CHVTIEGEPD HSGTTSMSER
RDALAAASEL VLAVESCASD MAAEGTGTAV GTVGHLSVDP NTVNVVPGGV SLRIDLRSTD
RPEIKTQLDT VRDSLADIEA QRDLSTTFDC TYDIPPTPLS ERCRRTVADA AHDQGVETTS
VYSGAGHDTM QVADVTDAAL LFVASQNGHS HSPKERADWD DCTTATRVLA DSLARLASTN
DQRPLNPQDK C
|
|---|
| |