Gene Hlac_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2744 
Symbol 
ID7401355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2733292 
End bp2734014 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID643709819 
Producthypothetical protein 
Protein accessionYP_002567385 
Protein GI222481148 
COG category[R] General function prediction only 
COG ID[COG3364] Zn-ribbon containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACC AATGTACCAC CTGCGGTCGG ACGTTCCCCG ACGGTTCGAA AGAGATGCTC 
TCCGGGTGTC CGGACTGCGG GGGGAATAAG TTCCAGTTCA AACCCGCCGG TGAGACGAGC
GCCGAGCAAC GGTCACCCGC CGGGAACCAG CCGTCGAATA CCGACCCCCA GTCACCTGAC
GCCAACCGCC AGTCACCTGA CGCCAACCGC CAGTCCGCCC CCGTCGACGA GGGCGCTCCC
GACGAGAGTG CCGGCCGTGT CACCGACACT CCCGCTCCCG ATTCCCAACG GTCTGACTCC
CAACCGTCCG AGGCTCGGAC GCCAGACGCT GGGACACCAG AATCCGAGAC ACCGGACGCT
CAGAAGACCG ACTCAGAACA CGTCCGCGAC CGGACCGAAG AGGATGTCGC GCAAGCGAGC
GCGCGCTCGG ATGTCGTCTC GCCCGACGAG CTCGATCGGG CGAGTCGAGA TATCGAAACG
GATTCGTCCT CGACCGGGTC TGATCCCGAC ACACCGACAG ATCCGGAGGG CCCGCGTCCC
GATATCGACG ACCTCCGAGA CGAGCTCAAC GAGCAGTTCG AGAGCATTCG GATCGTGAGC
CCCGGGAAGT ACGAGCTCAA CCTGATGGAG CTGTACGACC GACAGGAGTA CATCATCTCG
CTCCAGGAAG ACGGTCGATA CGTCATCGAG ATGCCCGACG CGTGGGGCAT CTCCGACGAG
TAG
 
Protein sequence
MPHQCTTCGR TFPDGSKEML SGCPDCGGNK FQFKPAGETS AEQRSPAGNQ PSNTDPQSPD 
ANRQSPDANR QSAPVDEGAP DESAGRVTDT PAPDSQRSDS QPSEARTPDA GTPESETPDA
QKTDSEHVRD RTEEDVAQAS ARSDVVSPDE LDRASRDIET DSSSTGSDPD TPTDPEGPRP
DIDDLRDELN EQFESIRIVS PGKYELNLME LYDRQEYIIS LQEDGRYVIE MPDAWGISDE