Gene Hlac_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2643 
Symbol 
ID7400848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2626186 
End bp2627016 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID643709715 
ProductABC-2 type transporter 
Protein accessionYP_002567284 
Protein GI222481047 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.622049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC CCGCCATCGC GGAGAAGGAC TTCCAAGACA CCGTGCGCTC TCGGGGGATG 
TTGATCCTCG TGGCGCTGTT CTCGCTGCTC GTCGCCGTCT TCGCGTACGT CTTCGCGCCG
CCCGGAGAGC AGTTCGCGAC GGAGTTCCTG TTGAGCGCCG CCGTTGGCCC CTTCCTGGTG
ACGACGCTCG TCCCGCTCGT GGGCGTCGTC GTCGGGTACA ACGCCGTCAG CGGCGAGCGC
GAGTCGGGCT CGCTGAAGCT ACTCTTGTCG CTGCCGCACT CCCGCGCTGA CGTGGTCTTC
GGAAAGGTGG TCGGGCGGGG CGCCGCGCTG TCGCTCGCGG TGTTCTCCGG CTTCCTTCTC
CCGGCACTCG TGTTGCTTGC ACTCTCTCAG CTCGGATACA TCGAGGCGTT CAACGTCGGT
TCGTACCTCG GGTACACCGT CTTCGCCGCG GTCCTCGGCG TCGTCTTCGT CGCGATTGCG
GTCGGCTGCT CGGCCGCGGC GACGACACAG CGACAGGCGC TCATCGGCGG GGTCGCGATC
TACGTCCTGT TCGTGATGCT GTGGGGCGCC ATCACCGGAC AGTTCCTCGG TGCCGCGGCC
GACGCGGGGC TGATCAACCC CTTGCCGGTC TCCCAACAGC AGGTCAGCGT GTTCCTACAG
GTCGCGAACC CGATAACCGG GGTCGAACTG CTGTCCAACG CGTTCCTTAG CGGCCAGCTA
CTCTCGGGCG AGGCCGTCAA CCAGCAGATC TCGGCGGTGT CGATGCTCGT GTTCTGGACG
ATCGCACCGC CGCTGGCCGG GCTCTGGAAG TTCGACACCG ACGATTTATA A
 
Protein sequence
MSLPAIAEKD FQDTVRSRGM LILVALFSLL VAVFAYVFAP PGEQFATEFL LSAAVGPFLV 
TTLVPLVGVV VGYNAVSGER ESGSLKLLLS LPHSRADVVF GKVVGRGAAL SLAVFSGFLL
PALVLLALSQ LGYIEAFNVG SYLGYTVFAA VLGVVFVAIA VGCSAAATTQ RQALIGGVAI
YVLFVMLWGA ITGQFLGAAA DAGLINPLPV SQQQVSVFLQ VANPITGVEL LSNAFLSGQL
LSGEAVNQQI SAVSMLVFWT IAPPLAGLWK FDTDDL