| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2627 |
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| Symbol | |
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| ID | 7400832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2610310 |
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| End bp | 2612481 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709699 |
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| Product | DEAD_2 domain protein |
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| Protein accession | YP_002567268 |
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| Protein GI | 222481031 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.510755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAAG CGCCGCATCT GCGGTTCTTC CCGTACGAGG AGCCGTACCC GAACCAGCGC
GAGGCGATGG ACAGGGTCGC CAACGCGCTG GACCGCGGGC AGGACGTGCT GTTCGAGGGC
GCACCCGGGA CGGGGAAGAC CCTCTCCGCA CTCGTGCCCG CCTTGGAACA CGCCCGTGAA
CACGACCGCA CGGTCGTCAT TACGACCAAC GTCCACCAGC AGATGCGGCA GTTCGTCGAG
GACGCCCGCG CGATCACCCG CGAAACGCCC ATCCGCGCGG TCGTATTTAA AGGGAAGTCG
TCGATGTGCC ACATCGACGT CGACTACCAG GAGTGTCAAA CTCTCCGGGA CACCACCCGC
GAGATGGTGG AGACCGAGAG CGAGGTCCGC GAGCTGGAGA CCCGCCAGCG CGAGCTGCTG
GCCGAGAGCC GCGAGGGCGA CGCGGGGGCG GCCGAGGCTC GCGAGTCGGT GATGGACGAG
CTCGACGAGC TGGAGGCCGA TATCGACGAG TACGACGCCG CAAACGTCTG TGCCCACTAC
CGAAATAACC TCGTCGAGGA CACCGACGAG TTCTTCGGGT GGCTCTTCGA GGACGTTCGC
ACCCCAGAGG ACGTGTACGC GTACGCGGAC GAGCGTGAAC TCTGCGGCTA CGAGCTGCTG
AAGGAGGGGA TGGAGGGCGT CGATCTGGTG GTCTGTAACT ACCACCACCT GCTGGATCCC
AACATCCGCG AGCAGTTCTT CCGGTGGATC GACCGCGACC CCTCCGAGAT AATCACCGTC
TTCGACGAAG CCCACAACGT CGAGGACGCC GCCCGCGACC ACGCCACCCG GACTCTCACC
GAGAATACGC TCGACGCCGC CCTCGACGAA CTCACGGAGA GCGACGACTC CCGCGCCGAG
GCAGCCGAAA ACGTCGTTCG CGCGTTCCGC GATGCCTTAG TCGAGACGCG CGACGATGCG
CTCGGCGTCG GCAAGCACGA GTCGATCGGC GAGAATTGGG AGGATATCTC GATCGCCAAC
GACGACCGCC GTGACGACCT CACGCTTGCG TTCCTCCGCA ACTACGAGGG GAAGGGGATC
GACACGGAGA CCGAGCTCGC CGTCCAGCTC GGACAGGCGC TCGACGAGGA GTACGAGCGC
CGCTACCGCG ACGGCGAGAC CACGACCCGC ACCGAGTGCC AGATCCTGCA GGCCGCCCGG
TTCGTCTCGA CGTGGATGGA GGAGGGCACG GAGCTCGGCC AGTACCCGGT CGTCTCCGTG
CGCCGCGACG GCGCCACCGA GGAGGTGTAC GGCCGCGCGG AGCTGTACAC CTGCATCCCC
CGTCGCGTCA CCGAAGAGCT GTTCGACGAG GTCGCCGCCT CGGTGCTGAT GAGCGCGACA
CTTCGTCCCT TCGACGTTAC CAAGGACGTG CTCGGGCTGG AGGACGTGGC GTCGCTCGCG
TACGGGATGG GATATCCCGA GGAGAACCGA CGGACGTTCG CGGTCGATAC GCCCCCGCTT
TTCGCCTCCG AGCGTAACGA CCCGGAGACG CAGGAGACGG TGGCGTCGCT GCTGCGCGAC
GCGATCCGCT TCACCCCGGG GAACACGCTC GCCTTCTTCC CCTCCTACGC CGAGGCCGAG
CGCTACTACG AGCGGCTCGG AGGCGCCGAC CTCGGCTCCC TCTACCTCGA CGGTCCCGGC
GAGGACGAGG AGAAACTTCG CCGGCGATTC GTCGAGAGCG ACGACGCGAC CCTCTTCACC
TCCCTCTGGG GAACGCTCGC AGAGGGTGTG AGCTTCGACG GCGACGACGC TCGGACGGTC
GTGGTCGTCG GGGTCCCCTA TCCGCACCTC TCGGATCGGA TGGAGGCGGT CCAGGATGCG
TACAATCGGG TGTTCGCCGA CCGCGACCGC TCTCGGGACC CCGGCTGGGC GTACGCGGTC
GAGATCCCGA CGATCCGTAA GACCCGACAG GCGATCGGTC GCGTGGTCCG CGGCCCGGAC
GACTTCGGCG TCCGGATCCT CGCGGACCGT CGATACACGT CCGCAGACAT GGGGAAGTAC
TCGGTCCGCG GCGCGTTCCC GCCGGAGGAA CGCGAGGAGC TACTCGATCT CGACCCGGAG
AAGCTGAAGT TCGCGATGCT GAACTTCTAC GGCGATCACG ACGCCTACGA CGGGGCGCCG
CCGGAGCCGT GA
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| Protein sequence | MSEAPHLRFF PYEEPYPNQR EAMDRVANAL DRGQDVLFEG APGTGKTLSA LVPALEHARE
HDRTVVITTN VHQQMRQFVE DARAITRETP IRAVVFKGKS SMCHIDVDYQ ECQTLRDTTR
EMVETESEVR ELETRQRELL AESREGDAGA AEARESVMDE LDELEADIDE YDAANVCAHY
RNNLVEDTDE FFGWLFEDVR TPEDVYAYAD ERELCGYELL KEGMEGVDLV VCNYHHLLDP
NIREQFFRWI DRDPSEIITV FDEAHNVEDA ARDHATRTLT ENTLDAALDE LTESDDSRAE
AAENVVRAFR DALVETRDDA LGVGKHESIG ENWEDISIAN DDRRDDLTLA FLRNYEGKGI
DTETELAVQL GQALDEEYER RYRDGETTTR TECQILQAAR FVSTWMEEGT ELGQYPVVSV
RRDGATEEVY GRAELYTCIP RRVTEELFDE VAASVLMSAT LRPFDVTKDV LGLEDVASLA
YGMGYPEENR RTFAVDTPPL FASERNDPET QETVASLLRD AIRFTPGNTL AFFPSYAEAE
RYYERLGGAD LGSLYLDGPG EDEEKLRRRF VESDDATLFT SLWGTLAEGV SFDGDDARTV
VVVGVPYPHL SDRMEAVQDA YNRVFADRDR SRDPGWAYAV EIPTIRKTRQ AIGRVVRGPD
DFGVRILADR RYTSADMGKY SVRGAFPPEE REELLDLDPE KLKFAMLNFY GDHDAYDGAP
PEP
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