Gene Hlac_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2598 
Symbol 
ID7399824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2576909 
End bp2577481 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content73% 
IMG OID643709671 
Productprotein of unknown function DUF309 
Protein accessionYP_002567240 
Protein GI222481003 
COG category[S] Function unknown 
COG ID[COG1547] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.581057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGC ACACCCGCGA TCCCGGCGTC GCCCCGCCGC TCGGGAACCC GACCGGGTGG 
CACGCGGCTG GCGAGGGCGG CGCAGACGAG GGCGGCGCGG GCGACGGCGG CGCGGACGGT
GGTGACCCGG ACGCCGACGC GCGACTCGCC GGCGGCCACT GGGAGCACGC TACCCTCCGG
CGGGCGACCG AGCACGGCGT CCGGCTGTTC AACGCCGGGG CGTACCACGA GTCGCACGAC
TGCTTCGAGG ACGAGTGGTA CAACTACGGC AGCGGCACCG CCGAGAGCGC CTTCCTTCAC
GGGATGGTGC AGGTCGCGGC GGGCGCGTAC AAGCGCGTCG ACTTCGAGAA CGACGACGGG
ATGCGGTCGC TGTTCGAGAC CGCACTGGAG TACCTCCGCG GGATCCCGGG CGACTTCTAC
GGCGTCGACC TCGACGAGGT CCGGGCGACG CTCCGGGCCG CGCTCGACGA CCCGACCGCG
ATCGACGGGT GGAAGATTAC CATCGACGGC GCCCGCCCGG AGGCGTACCC GGCCGACTAC
GAGTACGCGG AGCGGCTCGA CGAGGGGCAC TGA
 
Protein sequence
MDEHTRDPGV APPLGNPTGW HAAGEGGADE GGAGDGGADG GDPDADARLA GGHWEHATLR 
RATEHGVRLF NAGAYHESHD CFEDEWYNYG SGTAESAFLH GMVQVAAGAY KRVDFENDDG
MRSLFETALE YLRGIPGDFY GVDLDEVRAT LRAALDDPTA IDGWKITIDG ARPEAYPADY
EYAERLDEGH