| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2553 |
|---|
| Symbol | |
|---|
| ID | 7399778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2530138 |
|---|
| End bp | 2530701 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643709625 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002567195 |
|---|
| Protein GI | 222480958 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.165021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATC CATCGGTCCT CGTCGTCGAG GACGAGCCGG ATATCGCCGC GTTGTACGCC
GGCTTCCTCG AAGAGCGATA CGACGTAGAT CTCGCCGAGA CAGCCGCCGA GGCGATCGAT
CGGGTCGACG GCGCGGTCGA CGTGGTGTTG CTCGACCGTC GACTCCCAGA CGGGAGCGGC
GACGACGTGC TCGAACACAT CCGTGAGGCC GGCTACGACT GTCGGGTCGC GATGGTCACC
GCCGTCGAGC CCGACTTTGA CATCATCGAC ATGGGGTTCG ATCTGTACCT CACCAAGCCC
GTCAGTCGCT CGAAGCTGCT GGCGGCGATC GAGACGCTGT TGACCCGCAG CGAGTACGAC
GGCCTGATCC AGGAGGCCGC GGCGTTGGCG AGCAAGCGCG CGGTGCTCAA CACCCAGAAG
CCGGCCGCCC AACGTGAAGG GAACGAGTCG TACGCCGAAC TGGTCGAGCG GCTCGAAGAC
CTCGACGCCA ACATCGACGA GCTCGGCGAG TCGCTATCCT CCGACGACTA CCGCGCGATG
TTCCGTGATC TCGGTGAGGC CTGA
|
|---|
| Protein sequence | MSNPSVLVVE DEPDIAALYA GFLEERYDVD LAETAAEAID RVDGAVDVVL LDRRLPDGSG
DDVLEHIREA GYDCRVAMVT AVEPDFDIID MGFDLYLTKP VSRSKLLAAI ETLLTRSEYD
GLIQEAAALA SKRAVLNTQK PAAQREGNES YAELVERLED LDANIDELGE SLSSDDYRAM
FRDLGEA
|
|---|
| |