Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2534 |
Symbol | rplP0 |
ID | 7401587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2509181 |
End bp | 2510218 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643709607 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_002567177 |
Protein GI | 222480940 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.290295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGG TCCGCAAGAC CGAGACGATC CCGCAGTGGA AACAGGAGGA GGTCGACGAG CTCGTCGACT TTATCGAGTC GTTCAACTCC GTCGGGATCG TCGGCGTCGC CGGCATCCCG AGCCGCCAGC TTCAGGCCAT GCGCCGCGAG CTGCACGGCT CCGCGGACGT CCGGATGAGC CGCAACACGC TCACCGTCCG TGCGCTCGAA GAGGTAAACG ACGGCGTCGA AGAGCTGACC CAGTACGTCG CGGGTCAGGT CGCGCTCATC GGCACGAACG ACAACCCGTT CGGCCTCTTC AAGCAGCTGG AAGCCTCGAA GACCCCCGCC CCGATCAACG CGGGCGAGGT CGCCCCCAAC GACGTCGTCA TCCCCGAGGG TGACACGGGC GTCGACCCGG GACCGTTCGT CGGCGAGCTC CAGACTGTCG GGGCCGCCGC GCGCATTCAG GACGGCTCGA TCATGGTCAC CGAGGACTCG AAGGTCCTCG AAGAGGGCGA GGTCGTCGAC GACGACCTCG CGAACGTCCT GACCGAACTC GGCATCGAGC CGAAGGAAGT CGGACTCGAC CTCAAGGGCG TCTACTCCGA GGGCGTCCTG TTCGAGCCGG ACGAGCTCGA AATCGACGTC GACGAGTACG AAGCGGACAT CCGCTCGGCG GCCGCCGCCG CGCGAAACCT CTCGGTCAAC GCCGCGTACC CGACGGCCGC CACCGCCGGC ACCCTTCTCG CGAAGGCGTC CGGCGAGGCC AAGTCCGTCG GACTGTTCGC GGAGATCGAG AGCCCGGACG TCGTGCCCGA CCTCATCGGG AAGGCCGACG CCCAGCTCCG CTCGCTCGCG GCCCAGATCG ACGACGAGGA GGCGCTTCCC GAGGAGCTGC AGGGCGTCGA AGCTGCCCCG GCTCCTGAGA CGGACGACGC CGACGAGGAA GAGGAACAGG CGGAGGAAGA AGACGACACG GACGACGCTG AGGCAGCCGA CGACGACGCC GACGACGGCG ACGACGGCGG CGACGGTCTC GGCGCGATGT TCGGATAA
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Protein sequence | MSSVRKTETI PQWKQEEVDE LVDFIESFNS VGIVGVAGIP SRQLQAMRRE LHGSADVRMS RNTLTVRALE EVNDGVEELT QYVAGQVALI GTNDNPFGLF KQLEASKTPA PINAGEVAPN DVVIPEGDTG VDPGPFVGEL QTVGAAARIQ DGSIMVTEDS KVLEEGEVVD DDLANVLTEL GIEPKEVGLD LKGVYSEGVL FEPDELEIDV DEYEADIRSA AAAARNLSVN AAYPTAATAG TLLAKASGEA KSVGLFAEIE SPDVVPDLIG KADAQLRSLA AQIDDEEALP EELQGVEAAP APETDDADEE EEQAEEEDDT DDAEAADDDA DDGDDGGDGL GAMFG
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