Gene Hlac_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2533 
Symbolrpl12p 
ID7401586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2508824 
End bp2509162 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content72% 
IMG OID643709606 
Product50S ribosomal protein L12P 
Protein accessionYP_002567176 
Protein GI222480939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2058] Ribosomal protein L12E/L44/L45/RPP1/RPP2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.386824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.269455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACG TTTACGCTGC GCTCATCCTG AACGAGACTG GCGAAGAGAT CAACGAAGAC 
AACGTCACCG GCGTGCTCGA AGCCGCCGGC GTCGACGTCG AGGAATCCCG CGTCAAGGCG
CTCGTCGCCG CGCTGGAGGA CGTCGACATC GAGGAGGCCA TCGAGACGGC CGCCGCGGCC
CCCGCCGCCG GCGCCGCCGC GGGCGGCTCC GCGGACGCCG CGGACGCCGA CGAGGCCGCC
GACGAGAGCG ACGACGAGGA CGACGCCGCC GAGGAAGCGG CGGACGACGA GGACGAGGAC
GACGACGGCG GCGAGGGCCT CGGCGAGCTC TTCGGCTAA
 
Protein sequence
MEYVYAALIL NETGEEINED NVTGVLEAAG VDVEESRVKA LVAALEDVDI EEAIETAAAA 
PAAGAAAGGS ADAADADEAA DESDDEDDAA EEAADDEDED DDGGEGLGEL FG