Gene Hlac_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2526 
Symbol 
ID7401578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2504134 
End bp2504613 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content70% 
IMG OID643709598 
Productprotein of unknown function DUF192 
Protein accessionYP_002567169 
Protein GI222480932 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.632185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.272559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGCC GCCTCCTCGC GATCGCTAGC GCCCTCGGCG CCATCGCCCT CCTGCTCGTC 
GCGGCGATCG CGGCGAACCC GGCCCTCCTG ATCGCCGGCT ACGACACCAC GACCGTCGAG
GCGGTCGACG GCGAGACGGG CGACTCGCTC GCAACCGTCG AGACGCGCGT CGCAGACGGC
TTCGCGAAGC AGTACGTCGG CCTCTCCGAG ACTGACGAGC TCGCCGACGA CGAGGGAATG
CTGTTCGTCC ACGACGAGAC GGGCAAACAC GCCTACGTGA TGCGAGGAAT GTCGTTCGGG
CTCGACATCG TCTTCGTCGC GCCGAACGGC ACCGTCACCG AGATCCACGA GGCGGCGCCC
GACTCGCGCC CGTACACCCG CTATGCGGGC ACCGGTCGGT ACGTCCTCGA AGCGCCGCGA
GGGTGGAGCG AGCGCAACGG TGTCGGGCCG GGTGACCGGC TCGTCTTCGA GGTGGACTGA
 
Protein sequence
MNRRLLAIAS ALGAIALLLV AAIAANPALL IAGYDTTTVE AVDGETGDSL ATVETRVADG 
FAKQYVGLSE TDELADDEGM LFVHDETGKH AYVMRGMSFG LDIVFVAPNG TVTEIHEAAP
DSRPYTRYAG TGRYVLEAPR GWSERNGVGP GDRLVFEVD