Gene Hlac_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2525 
Symbol 
ID7401577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2503653 
End bp2504072 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID643709597 
Producthypothetical protein 
Protein accessionYP_002567168 
Protein GI222480931 
COG category[S] Function unknown 
COG ID[COG3462] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.186034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTC TCTCTCGCCG GATCGCGTGG AACCTTCGCC ACCGCTGGCG GCGGATATTC 
GCGCTCCTCG TGATCGGTAT CGGCGTCGCC GCCCCGCTCA TCACCGGGCT CTGGTGGTCG
CTGCCGCTCG TCTGGTTCTT CGGGCTGTTC GTCGCGTTGC CCGTCCTTCA CACGCTGACG
AAGCCGGTGC CCGACGAGGA TAGCGACGAC TCCGACGCCA ATGCCCCCGA CGACCCCGCC
CTCCGCGCGC TCCGCGAGCG CTACGCTCGC GGCGAGATCG ACGAGCGCGA GTTCGAGCGC
AAGCTCGACC GGCTGCTGGA GACCGAAGAC GCCGAGACCG TCGACCGCAG CGACGCCGAG
GACCTCGCCG AGCGCGTTCG CGACGGACTC CGGCGCGAAG TCGAGCGGGT TCGCGAGTGA
 
Protein sequence
MTGLSRRIAW NLRHRWRRIF ALLVIGIGVA APLITGLWWS LPLVWFFGLF VALPVLHTLT 
KPVPDEDSDD SDANAPDDPA LRALRERYAR GEIDEREFER KLDRLLETED AETVDRSDAE
DLAERVRDGL RREVERVRE