| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2522 |
|---|
| Symbol | |
|---|
| ID | 7401574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2500652 |
|---|
| End bp | 2501593 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643709594 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002567165 |
|---|
| Protein GI | 222480928 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.496953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG CAAAACCTCG AACCGACGGC GGCGCAACGG CGACGGCGCG GCTGCGCCGG
ACCATCGATC AGCTGACGGC CGAGGATATC GGCCTGTACG TTGTCCTGAC ACTCGCGGCG
GCGTTCTACC TCGTTCCCAT CGAATCTGGC CTGGTCACGT CGTTCAAGAC CGGCACCGCG
ATCATCGAGA CGGCGCCGTT CGCCCCACCC GGCCCGTCCG GGTTCACACT CGAGAAGTGG
CAGACGGCGA CCGATACCCT GCTGCGTGGG ATGGGGAACA GCCTGCTGTA CGCTGTGCCC
GCGACGGTCA TCTCGGCGTT CGTCGGGAGC GTCACGGCGT ACGGCCTGAC GATCCCAACC
TGGAAGAAGT CGTACAAGGC AGTGGTACTC ATGCTCATCG TCGCCGGGAT CTTCATCCCG
TATCAGGCGG TGCTGGTCCC GCTGACCCAG TTCTGGTCGC AGTGGGTCCA GCTCGGCGAC
GCGTTATCGT TCGTCTGGGC GCTCGGGATC GACGACGACT ACGTTGGCAT CATCGAGTTG
GTGATCACCC ACGTCGCCTA CGGGCTCCCC ATCTGTACGC TCCTGTTCCG GACGTACTAC
AAGACGATGA GCGACGAGAT GATCGAGTCG GCCCGCCTTG ACGGAGCGAC GCTCCGTCGG
GTGTACCGAC GGATCGTCCT CCCGCTCTCG GGACCGATGT TCGCCGTCGT CTTAATCTAT
CAGTTCACCC AGATCTGGAA CGATCTCCTC TTTACGCTGG TGATCGTCTC GACGGAATCG
AGCCCTGCGG CGCCCGTCGT GTTGATCCTT GCGGGACTCG GGAGCTCGCT GGAGGGACAA
GACTTCGCGC TCCGGATGGC CGGGGCATTC TTCGCGGCGC TGCCGACGCT TGCGGTGTAC
ATCCTCTTCG GCGAGGAGTT CGCCGAGGGG GTGGCGGCGT GA
|
|---|
| Protein sequence | MSNAKPRTDG GATATARLRR TIDQLTAEDI GLYVVLTLAA AFYLVPIESG LVTSFKTGTA
IIETAPFAPP GPSGFTLEKW QTATDTLLRG MGNSLLYAVP ATVISAFVGS VTAYGLTIPT
WKKSYKAVVL MLIVAGIFIP YQAVLVPLTQ FWSQWVQLGD ALSFVWALGI DDDYVGIIEL
VITHVAYGLP ICTLLFRTYY KTMSDEMIES ARLDGATLRR VYRRIVLPLS GPMFAVVLIY
QFTQIWNDLL FTLVIVSTES SPAAPVVLIL AGLGSSLEGQ DFALRMAGAF FAALPTLAVY
ILFGEEFAEG VAA
|
|---|
| |